PDB entry 2ldb

View 2ldb on RCSB PDB site
Description: structure determination and refinement of bacillus stearothermophilus lactate dehydrogenase
Class: oxidoreductase(choh(d)-nad(a))
Keywords: oxidoreductase(choh(d)-nad(a))
Deposited on 1989-03-27, released 1989-07-12
The last revision prior to the SCOP 1.75 freeze date was dated 1990-04-15, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 3 Å
R-factor: 0.26
AEROSPACI score: 0.13 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: l-lactate dehydrogenase
    Species: Bacillus stearothermophilus
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2ldba1, d2ldba2
  • Chain 'B':
    Compound: l-lactate dehydrogenase
    Species: Bacillus stearothermophilus
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2ldbb1, d2ldbb2
  • Chain 'C':
    Compound: l-lactate dehydrogenase
    Species: Bacillus stearothermophilus
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2ldbc1, d2ldbc2
  • Chain 'D':
    Compound: l-lactate dehydrogenase
    Species: Bacillus stearothermophilus
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2ldbd1, d2ldbd2
  • Heterogens: FBP, SO4, NAD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2ldbA (A:)
mknnggarvvvigagfvgasyvfalmnqgiadeivlidaneskaigdamdfnhgkvfapk
pvdiwhgdyddcrdadlvvicaganqkpgetrldlvdkniaifrsivesvmasgfqglfl
vatnpvdiltyatwkfsglphervigsgtildtarfrfllgeyfsvapqnvhayiigehg
dtelpvwsqayigvmpirklveskgeeaqkdlerifvnvrdaayqiiekkgatyygiamg
larvtrailhnenailtvsayldglygerdvyigvpavinrngirevieielnddeknrf
hhsaatlksvlaraftr

    Sequence, based on observed residues (ATOM records): (download) 
    >2ldbA (A:)
mknnggarvvvigagfvgasyvfalmnqgiadeivlidaneskaigdamdfnhgkvfapk
pvdiwdyddcrdadlvvicagaldlvdkniaifrsivesvmasgfqglflvatnpvdilt
yatwkfsglphervigsgtildtarfrfllgeyfsvapqnvhayiigehgdtelpvwsqa
yigvmpirklveskdlerifvnvrdaayqiiekkgatyygiamglarvtrailhnenail
tvsayldglygerdvyigvpavinrngirevieielnddeknrfhhsaatlksvlaraft
r

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2ldbB (B:)
mknnggarvvvigagfvgasyvfalmnqgiadeivlidaneskaigdamdfnhgkvfapk
pvdiwhgdyddcrdadlvvicaganqkpgetrldlvdkniaifrsivesvmasgfqglfl
vatnpvdiltyatwkfsglphervigsgtildtarfrfllgeyfsvapqnvhayiigehg
dtelpvwsqayigvmpirklveskgeeaqkdlerifvnvrdaayqiiekkgatyygiamg
larvtrailhnenailtvsayldglygerdvyigvpavinrngirevieielnddeknrf
hhsaatlksvlaraftr

    Sequence, based on observed residues (ATOM records): (download) 
    >2ldbB (B:)
mknnggarvvvigagfvgasyvfalmnqgiadeivlidaneskaigdamdfnhgkvfapk
pvdiwdyddcrdadlvvicagaldlvdkniaifrsivesvmasgfqglflvatnpvdilt
yatwkfsglphervigsgtildtarfrfllgeyfsvapqnvhayiigehgdtelpvwsqa
yigvmpirklveskdlerifvnvrdaayqiiekkgatyygiamglarvtrailhnenail
tvsayldglygerdvyigvpavinrngirevieielnddeknrfhhsaatlksvlaraft
r

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2ldbC (C:)
mknnggarvvvigagfvgasyvfalmnqgiadeivlidaneskaigdamdfnhgkvfapk
pvdiwhgdyddcrdadlvvicaganqkpgetrldlvdkniaifrsivesvmasgfqglfl
vatnpvdiltyatwkfsglphervigsgtildtarfrfllgeyfsvapqnvhayiigehg
dtelpvwsqayigvmpirklveskgeeaqkdlerifvnvrdaayqiiekkgatyygiamg
larvtrailhnenailtvsayldglygerdvyigvpavinrngirevieielnddeknrf
hhsaatlksvlaraftr

    Sequence, based on observed residues (ATOM records): (download) 
    >2ldbC (C:)
mknnggarvvvigagfvgasyvfalmnqgiadeivlidaneskaigdamdfnhgkvfapk
pvdiwdyddcrdadlvvicagaldlvdkniaifrsivesvmasgfqglflvatnpvdilt
yatwkfsglphervigsgtildtarfrfllgeyfsvapqnvhayiigehgdtelpvwsqa
yigvmpirklveskdlerifvnvrdaayqiiekkgatyygiamglarvtrailhnenail
tvsayldglygerdvyigvpavinrngirevieielnddeknrfhhsaatlksvlaraft
r

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2ldbD (D:)
mknnggarvvvigagfvgasyvfalmnqgiadeivlidaneskaigdamdfnhgkvfapk
pvdiwhgdyddcrdadlvvicaganqkpgetrldlvdkniaifrsivesvmasgfqglfl
vatnpvdiltyatwkfsglphervigsgtildtarfrfllgeyfsvapqnvhayiigehg
dtelpvwsqayigvmpirklveskgeeaqkdlerifvnvrdaayqiiekkgatyygiamg
larvtrailhnenailtvsayldglygerdvyigvpavinrngirevieielnddeknrf
hhsaatlksvlaraftr

    Sequence, based on observed residues (ATOM records): (download) 
    >2ldbD (D:)
mknnggarvvvigagfvgasyvfalmnqgiadeivlidaneskaigdamdfnhgkvfapk
pvdiwdyddcrdadlvvicagaldlvdkniaifrsivesvmasgfqglflvatnpvdilt
yatwkfsglphervigsgtildtarfrfllgeyfsvapqnvhayiigehgdtelpvwsqa
yigvmpirklveskdlerifvnvrdaayqiiekkgatyygiamglarvtrailhnenail
tvsayldglygerdvyigvpavinrngirevieielnddeknrfhhsaatlksvlaraft
r