PDB entry 2kdk

View 2kdk on RCSB PDB site
Description: Structure of human circadian clock protein BMAL2 C-terminal PAS domain
Class: transcription regulator
Keywords: circadian clock, PAS domain, transcription, Activator, Biological rhythms, DNA-binding, Nucleus, Transcription regulation, TRANSCRIPTION REGULATOR
Deposited on 2009-01-10, released 2011-04-13
The last revision prior to the SCOPe 2.06 freeze date was dated 2011-10-26, with a file datestamp of 2011-10-21.
Experiment type: NMR
Resolution: N/A
R-factor: N/A
AEROSPACI score: 0.03 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Aryl hydrocarbon receptor nuclear translocator-like protein 2
    Species: Homo sapiens [TaxId:9606]
    Gene: ARNTL2, BMAL2, CLIF, MOP9
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8WYA1 (3-120)
      • engineered (101)
    Domains in SCOPe 2.06: d2kdka_

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2kdkA (A:)
ghmnsgeinvkptefitrfavngkfvyvdqratailgylpqellgtscyeyfhqddhnnl
tdkhkavlqskekiltdsykfrakdgsfvtlksqwfsftnpdtkeleyivsvntlvlghs
e

    Sequence, based on observed residues (ATOM records): (download) 
    >2kdkA (A:)
nsgeinvkptefitrfavngkfvyvdqratailgylpqellgtscyeyfhqddhnnltdk
hkavlqskekiltdsykfrakdgsfvtlksqwfsftnpdtkeleyivsvntlvlghse