PDB entry 2kde

View 2kde on RCSB PDB site
Description: NMR structure of major S5a (196-306):K48 linked diubiquitin species
Class: protein binding
Keywords: protein complex, ubiquitin interacting motifs, Cytoplasm, Nucleus, Ubl conjugation, Alternative splicing, Phosphoprotein, Proteasome, PROTEIN BINDING
Deposited on 2009-01-06, released 2009-09-01
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-09-01, with a file datestamp of 2009-08-28.
Experiment type: NMR
Resolution: N/A
R-factor: N/A
AEROSPACI score: 0.03 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 26S proteasome non-ATPase regulatory subunit 4
    Species: Homo sapiens [TaxId:9606]
    Gene: PSMD4, MCB1
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Ubiquitin
    Species: Xenopus laevis [TaxId:8355]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d2kdeb_
  • Chain 'C':
    Compound: Ubiquitin
    Species: Xenopus laevis [TaxId:8355]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d2kdec_

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >2kdeB (B:)
    mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
    iqkestlhlvlrlrgg
    

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download)
    >2kdeC (C:)
    mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
    iqkestlhlvlrlrgg