PDB entry 2k6q

View 2k6q on RCSB PDB site
Description: LC3 p62 complex structure
Class: apoptosis inhibitor/apoptosis
Keywords: LC3, p62, Alternative splicing, Autophagy, Cytoplasm, Cytoplasmic vesicle, Lipoprotein, Membrane, Microtubule, Ubl conjugation pathway, Apoptosis, Differentiation, Endosome, Immune response, Metal-binding, Nucleus, Phosphoprotein, Zinc, Zinc-finger, APOPTOSIS INHIBITOR/APOPTOSIS COMPLEX
Deposited on 2008-07-17, released 2008-09-02
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: NMR
Resolution: N/A
R-factor: N/A
AEROSPACI score: 0.02 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Microtubule-associated proteins 1A/1B light chain 3B
    Species: Rattus norvegicus [TaxId:10116]
    Gene: Map1lc3b, Map1alc3, Map1lc3
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q62625 (1-120)
      • expression tag (0)
    Domains in SCOPe 2.07: d2k6qa2, d2k6qa3
  • Chain 'B':
    Compound: p62_peptide from Sequestosome-1
    Species: Rattus norvegicus [TaxId:10116]
    Database cross-references and differences (RAF-indexed):
    • Uniprot O08623 (1-16)
      • expression tag (0)

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download)
    >2k6qA (A:)
    smpsektfkqrrsfeqrvedvrlireqhptkipviierykgekqlpvldktkflvpdhvn
    mselikiirrrlqlnanqaffllvnghsmvsvstpisevyeserdedgflymvyasqetf
    g
    

  • Chain 'B':
    No sequence available.