PDB entry 2k6d

View 2k6d on RCSB PDB site
Description: CIN85 Sh3-C domain in complex with ubiquitin
Class: sh3 domain/ubiquitin
Keywords: CIN85, SH3 domain, ubiquitin, Alternative splicing, Apoptosis, Cell junction, Coiled coil, Cytoplasm, Cytoplasmic vesicle, Cytoskeleton, Endocytosis, Membrane, Phosphoprotein, Polymorphism, SH3-binding, Synapse, Synaptosome, Ubl conjugation, Nucleus, SH3 DOMAIN/UBIQUITIN COMPLEX
Deposited on 2008-07-07, released 2008-08-19
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: NMR
Resolution: N/A
R-factor: N/A
AEROSPACI score: 0.05 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: SH3 domain-containing kinase-binding protein 1
    Species: Homo sapiens [TaxId:9606]
    Gene: SH3KBP1, CIN85
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2k6da_
  • Chain 'B':
    Compound: Ubiquitin
    Species: Homo sapiens [TaxId:9606]
    Gene: RPS27A, UBA80, UBCEP1, UBA52, UBCEP2, UBB, UBC
    Database cross-references and differences (RAF-indexed):
    • Uniprot P62988 (0-74)
      • expression tag (75)
    Domains in SCOPe 2.06: d2k6db2, d2k6db3

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download)
    >2k6dA (A:)
    kskdyckvifpyeaqnddeltikegdivtlinkdcidvgwwegelngrrgvfpdnfvkll
    pp
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >2k6dB (B:)
    mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
    iqkestlhlvlrlrgc