PDB entry 2jls
View 2jls on RCSB PDB site
Description: dengue virus 4 ns3 helicase in complex with ADP
Class: hydrolase
Keywords: ribonucleoprotein, nucleotide-binding, viral nucleoprotein, endoplasmic reticulum, helicase, protease, hydrolase, transferase, cleavage on pair of basic residues, multifunctional enzyme, transcription regulation, nucleotidyltransferase, ns3 helicase structure, ADP, virion, ATPase, nucleus, membrane, secreted, ATP-binding, RNA-binding, flaviviruses, glycoprotein, RNA-directed RNA polymerase, RNA replication, serine protease, envelope protein, dengue virus, metal-binding, transmembrane, transcription, phosphoprotein, capsid protein
Deposited on
2008-09-15, released
2008-11-25
The last revision prior to the SCOPe 2.03 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-31.
Experiment type: XRAY
Resolution: 2.23 Å
R-factor: 0.1883
AEROSPACI score: 0.4
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: serine protease subunit ns3
Species: DENGUE VIRUS 4 [TaxId:408688]
Database cross-references and differences (RAF-indexed):
- PDB 2JLS
- conflict (82)
- conflict (124)
- conflict (153)
- conflict (213)
- conflict (312)
- Uniprot Q2YHF0 (Start-450)
Domains in SCOPe 2.03: d2jlsa1, d2jlsa2 - Heterogens: MN, ADP, BME, CL, GOL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2jlsA (A:)
gsamgepdyevdedifrkkrltimdlhpgagktkrilpsivrealkrrlrtlilaptrvv
aaemeealrglpiryqtpavksdhtgreivdlmchatfttrllsstrvpnynlivmdeah
ftdpcsvaargyistrvemgeaaaifmtatppgstdpfpqsnspiediereiperswntg
fdwitdyqgktvwfvpsikagndianclrksgkrviqlsrktfdteypktkltdwdfvvt
tdisemganfragrvidprrclkpviltdgpervilagpipvtpasaaqrrgrigrnpaq
eddqyvfsgdplkndedhahwteakmlldniytpegiiptlfgperektqaidgefrlrg
eqrktfvelmrrgdlpvwlsykvasagisykdrewcftgernnqileenmeveiwtrege
kkklrpkwldarvyadpmalkdfkefasgrk
Sequence, based on observed residues (ATOM records): (download)
>2jlsA (A:)
yevdedifrkkrltimdlhpgagktkrilpsivrealkrrlrtlilaptrvvaaemeeal
rglpiryqtpavksdhtgreivdlmchatfttrllsstrvpnynlivmdeahftdpcsva
argyistrvemgeaaaifmtatppgstdpfpqsnspiediereiperswntgfdwitdyq
gktvwfvpsikagndianclrksgkrviqlsrktfdteypktkltdwdfvvttdisemga
nfragrvidprrclkpviltdgpervilagpipvtpasaaqrrgrigrnpaqeddqyvfs
gdplkndedhahwteakmlldniytpegiiptlfgperektqaidgefrlrgeqrktfve
lmrrgdlpvwlsykvasagisykdrewcftgernnqileenmeveiwtregekkklrpkw
ldarvyadpmalkdfkefasgrk