PDB entry 2jlp

View 2jlp on RCSB PDB site
Description: crystal structure of human extracellular copper-zinc superoxide dismutase.
Class: oxidoreductase
Keywords: glycolisation, oxidoreductase, heparin binding, heparin-binding, oxidative stress, antioxidant, glycoprotein, metal-binding, cu-zn, secreted, glycation
Deposited on 2008-09-14, released 2009-03-17
The last revision prior to the SCOPe 2.04 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-31.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: 0.152
AEROSPACI score: 0.58 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: extracellular superoxide dismutase (cu-zn)
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P08294
      • conflict (39)
    Domains in SCOPe 2.04: d2jlpa_
  • Chain 'B':
    Compound: extracellular superoxide dismutase (cu-zn)
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P08294
      • conflict (39)
    Domains in SCOPe 2.04: d2jlpb_
  • Chain 'C':
    Compound: extracellular superoxide dismutase (cu-zn)
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P08294
      • conflict (39)
    Domains in SCOPe 2.04: d2jlpc_
  • Chain 'D':
    Compound: extracellular superoxide dismutase (cu-zn)
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P08294
      • conflict (39)
    Domains in SCOPe 2.04: d2jlpd_
  • Heterogens: CU, ZN, SCN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2jlpA (A:)
wtgedsaepnsdsaewirdmyakvteiwqevmqrrdddgtlhaacqvqpsatldaaqprv
tgvvlfrqlaprakldaffalegfptepnsssraihvhqfgdlsqgcestgphynplavp
hpqhpgdfgnfavrdgslwryraglaaslagphsivgravvvhageddlgrggnqasven
gnagrrlaccvvgvcgpglwerqarehserkkrrreseckaa

    Sequence, based on observed residues (ATOM records): (download) 
    >2jlpA (A:)
dgtlhaacqvqpsatldaaqprvtgvvlfrqlaprakldaffalegfptepnsssraihv
hqfgdlsqgcestgphynplavphpqhpgdfgnfavrdgslwryraglaaslagphsivg
ravvvhageddlgrggnqasvengnagrrlaccvvgvcgpglwerqar

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2jlpB (B:)
wtgedsaepnsdsaewirdmyakvteiwqevmqrrdddgtlhaacqvqpsatldaaqprv
tgvvlfrqlaprakldaffalegfptepnsssraihvhqfgdlsqgcestgphynplavp
hpqhpgdfgnfavrdgslwryraglaaslagphsivgravvvhageddlgrggnqasven
gnagrrlaccvvgvcgpglwerqarehserkkrrreseckaa

    Sequence, based on observed residues (ATOM records): (download) 
    >2jlpB (B:)
gtlhaacqvqpsatldaaqprvtgvvlfrqlaprakldaffalegfptepnsssraihvh
qfgdlsqgcestgphynplavphpqhpgdfgnfavrdgslwryraglaaslagphsivgr
avvvhageddlgrggnqasvengnagrrlaccvvgvcgpglwerqa

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2jlpC (C:)
wtgedsaepnsdsaewirdmyakvteiwqevmqrrdddgtlhaacqvqpsatldaaqprv
tgvvlfrqlaprakldaffalegfptepnsssraihvhqfgdlsqgcestgphynplavp
hpqhpgdfgnfavrdgslwryraglaaslagphsivgravvvhageddlgrggnqasven
gnagrrlaccvvgvcgpglwerqarehserkkrrreseckaa

    Sequence, based on observed residues (ATOM records): (download) 
    >2jlpC (C:)
dgtlhaacqvqpsatldaaqprvtgvvlfrqlaprakldaffalegfptepnsssraihv
hqfgdlsqgcestgphynplavphpqhpgdfgnfavrdgslwryraglaaslagphsivg
ravvvhageddlgrggnqasvengnagrrlaccvvgvcgpglwerqa

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2jlpD (D:)
wtgedsaepnsdsaewirdmyakvteiwqevmqrrdddgtlhaacqvqpsatldaaqprv
tgvvlfrqlaprakldaffalegfptepnsssraihvhqfgdlsqgcestgphynplavp
hpqhpgdfgnfavrdgslwryraglaaslagphsivgravvvhageddlgrggnqasven
gnagrrlaccvvgvcgpglwerqarehserkkrrreseckaa

    Sequence, based on observed residues (ATOM records): (download) 
    >2jlpD (D:)
ddgtlhaacqvqpsatldaaqprvtgvvlfrqlaprakldaffalegfptepnsssraih
vhqfgdlsqgcestgphynplavphpqhpgdfgnfavrdgslwryraglaaslagphsiv
gravvvhageddlgrggnqasvengnagrrlaccvvgvcgpglwerqar