PDB entry 2j9u

View 2j9u on RCSB PDB site
Description: 2 Angstrom X-ray structure of the yeast ESCRT-I Vps28 C-terminus in complex with the NZF-N domain from ESCRT-II
Class: protein transport
Keywords: zinc-finger, metal-binding, protein transport
Deposited on 2006-11-16, released 2007-01-23
The last revision prior to the SCOPe 2.08 freeze date was dated 2018-01-24, with a file datestamp of 2018-01-19.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: vacuolar protein sorting-associated protein 28
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2j9ua_
  • Chain 'B':
    Compound: vacuolar protein sorting-associated protein 36
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2j9ub1
  • Chain 'C':
    Compound: vacuolar protein sorting-associated protein 28
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2j9uc_
  • Chain 'D':
    Compound: vacuolar protein sorting-associated protein 36
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2j9ud_
  • Heterogens: ZN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2j9uA (A:)
mfnakyvaeatgnfitvmdalklnynakdqlhpllaellisinrvtrddfenrsklidwi
vrinklsigdtltetqirellfdlelayksfyalld

    Sequence, based on observed residues (ATOM records): (download) 
    >2j9uA (A:)
fnakyvaeatgnfitvmdalklnynakdqlhpllaellisinrvtrddfenrsklidwiv
rinklsigdtltetqirellfdlelayksfyall

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2j9uB (B:)
mahhhhhhmasadvvstwvcpicmvsnetqgeftkdtlptpicincgvpadyeltkssin
csnaidpnanprnqfg

    Sequence, based on observed residues (ATOM records): (download) 
    >2j9uB (B:)
vstwvcpicmvsnetqgeftkdtlptpicincgvpadyeltkssinc

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2j9uC (C:)
mfnakyvaeatgnfitvmdalklnynakdqlhpllaellisinrvtrddfenrsklidwi
vrinklsigdtltetqirellfdlelayksfyalld

    Sequence, based on observed residues (ATOM records): (download) 
    >2j9uC (C:)
fnakyvaeatgnfitvmdalklnynakdqlhpllaellisinrvtrddfenrsklidwiv
rinklsigdtltetqirellfdlelayksfyall

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2j9uD (D:)
mahhhhhhmasadvvstwvcpicmvsnetqgeftkdtlptpicincgvpadyeltkssin
csnaidpnanprnqfg

    Sequence, based on observed residues (ATOM records): (download) 
    >2j9uD (D:)
vstwvcpicmvsnetqgeftkdtlptpicincgvpadyeltkssinc