PDB entry 2j3z

View 2j3z on RCSB PDB site
Description: crystal structure of the enzymatic component c2-I of the c2-toxin from clostridium botulinum at ph 6.1
Class: toxin
Keywords: ADP-ribosyltransferase, toxin, clostridium botulinum
Deposited on 2006-08-23, released 2006-10-11
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.201
AEROSPACI score: 0.35 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: c2 toxin component I
    Species: Clostridium botulinum [TaxId:1491]
    Database cross-references and differences (RAF-indexed):
    • Uniprot O69275 (Start-430)
      • engineered mutation (76)
      • conflict (120)
    Domains in SCOPe 2.06: d2j3za1, d2j3za2
  • Chain 'B':
    Compound: c2 toxin component I
    Species: Clostridium botulinum [TaxId:1491]
    Database cross-references and differences (RAF-indexed):
    • Uniprot O69275 (Start-430)
      • engineered mutation (76)
      • conflict (120)
    Domains in SCOPe 2.06: d2j3zb1, d2j3zb2
  • Chain 'C':
    Compound: c2 toxin component I
    Species: Clostridium botulinum [TaxId:1491]
    Database cross-references and differences (RAF-indexed):
    • Uniprot O69275
      • engineered mutation (76)
      • conflict (120)
    Domains in SCOPe 2.06: d2j3zc1, d2j3zc2
  • Chain 'D':
    Compound: c2 toxin component I
    Species: Clostridium botulinum [TaxId:1491]
    Database cross-references and differences (RAF-indexed):
    • Uniprot O69275
      • engineered mutation (76)
      • conflict (120)
    Domains in SCOPe 2.06: d2j3zd1, d2j3zd2
  • Chain 'E':
    Compound: c2 toxin component I
    Species: Clostridium botulinum [TaxId:1491]
    Database cross-references and differences (RAF-indexed):
    • Uniprot O69275
      • engineered mutation (76)
      • conflict (120)
    Domains in SCOPe 2.06: d2j3ze1
  • Chain 'F':
    Compound: c2 toxin component I
    Species: Clostridium botulinum [TaxId:1491]
    Database cross-references and differences (RAF-indexed):
    • Uniprot O69275
      • engineered mutation (76)
      • conflict (120)
    Domains in SCOPe 2.06: d2j3zf1, d2j3zf2
  • Heterogens: CO, GOL, SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >2j3zA (A:)
    mpiikepidfinkpeseakkwgkeeekrwftklnnleevavnqlknkeyktkidnfstdi
    lfssltaieimkedenrnlfdverireallkntldrdaigyvnftpkelginfsirdvel
    drdisdetldkvrqqiinqeytkfsfislglndnsinesvpvivktrvpttfdygvlndk
    etvslllnqgfsiipesaiittikgkdyiliegslsqeldfynkgseawgaenygdyisk
    lsheqlgalegylhsdykainsylrnnrvpnndelnkkielissalsvkpipqtliayrr
    vdgipfdlpsdfsfdkkengeiiadkqklnefidkwtgkeienlsfsstslkstpssfsk
    srfifrlrlsegaigafiygfsgfqdeqeillnknstfkifritpitsiinrvtkmtqvv
    idaegiqnkei
    

    Sequence, based on observed residues (ATOM records): (download)
    >2j3zA (A:)
    piikepidfinkpeseakkwgkeeekrwftklnnleevavnqlknkeyktkidnfstdil
    fssltaieimkedenrnlfdverireallkntldrdaigyvnftpkelginfsirdveld
    rdisdetldkvrqqiinqeytkfsfislglndnsinesvpvivktrvpttfdygvlndke
    tvslllnqgfsiipesaiittikgkdyiliegslsqeldfynkgseawgaenygdyiskl
    sheqlgalegylhsdykainsylrnnrvpnndelnkkielissalsvkpipqtliayrrv
    dgipfdlpsdfsfdkkengeiiadkqklnefidkwtgkeienlsfsstslkstpssfsks
    rfifrlrlsegaigafiygfsgfqdeqeillnknstfkifritpitsiinrvtkmtqvvi
    daegiqnkei
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >2j3zB (B:)
    mpiikepidfinkpeseakkwgkeeekrwftklnnleevavnqlknkeyktkidnfstdi
    lfssltaieimkedenrnlfdverireallkntldrdaigyvnftpkelginfsirdvel
    drdisdetldkvrqqiinqeytkfsfislglndnsinesvpvivktrvpttfdygvlndk
    etvslllnqgfsiipesaiittikgkdyiliegslsqeldfynkgseawgaenygdyisk
    lsheqlgalegylhsdykainsylrnnrvpnndelnkkielissalsvkpipqtliayrr
    vdgipfdlpsdfsfdkkengeiiadkqklnefidkwtgkeienlsfsstslkstpssfsk
    srfifrlrlsegaigafiygfsgfqdeqeillnknstfkifritpitsiinrvtkmtqvv
    idaegiqnkei
    

    Sequence, based on observed residues (ATOM records): (download)
    >2j3zB (B:)
    piikepidfinkpeseakkwgkeeekrwftklnnleevavnqlknkeyktkidnfstdil
    fssltaieimkedenrnlfdverireallkntldrdaigyvnftpkelginfsirdveld
    rdisdetldkvrqqiinqeytkfsfislglndnsinesvpvivktrvpttfdygvlndke
    tvslllnqgfsiipesaiittikgkdyiliegslsqeldfynkgseawgaenygdyiskl
    sheqlgalegylhsdykainsylrnnrvpnndelnkkielissalsvkpipqtliayrrv
    dgipfdlpsdfsfdkkengeiiadkqklnefidkwtgkeienlsfsstslkstpssfsks
    rfifrlrlsegaigafiygfsgfqdeqeillnknstfkifritpitsiinrvtkmtqvvi
    daegiqnkei
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >2j3zC (C:)
    mpiikepidfinkpeseakkwgkeeekrwftklnnleevavnqlknkeyktkidnfstdi
    lfssltaieimkedenrnlfdverireallkntldrdaigyvnftpkelginfsirdvel
    drdisdetldkvrqqiinqeytkfsfislglndnsinesvpvivktrvpttfdygvlndk
    etvslllnqgfsiipesaiittikgkdyiliegslsqeldfynkgseawgaenygdyisk
    lsheqlgalegylhsdykainsylrnnrvpnndelnkkielissalsvkpipqtliayrr
    vdgipfdlpsdfsfdkkengeiiadkqklnefidkwtgkeienlsfsstslkstpssfsk
    srfifrlrlsegaigafiygfsgfqdeqeillnknstfkifritpitsiinrvtkmtqvv
    idaegiqnkei
    

    Sequence, based on observed residues (ATOM records): (download)
    >2j3zC (C:)
    piikepidfinkpeseakkwgkeeekrwftklnnleevavnqlknkeyktkidnfstdil
    fssltaieimkedenrnlfdverireallkntldrdaigyvnftpkelginfsirdveld
    rdisdetldkvrqqiinqeytkfsfislglndnsinesvpvivktrvpttfdygvlndke
    tvslllnqgfsiipesaiittikgkdyiliegslsqeldfynkgseawgaenygdyiskl
    sheqlgalegylhsdykainsylrnnrvpnndelnkkielissalsvkpipqtliayrrv
    dgipfdlpsdfsfdkkengeiiadkqklnefidkwtgkeienlsfsstslkstpssfsks
    rfifrlrlsegaigafiygfsgfqdeqeillnknstfkifritpitsiinrvtkmtqvvi
    daegiqnk
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >2j3zD (D:)
    mpiikepidfinkpeseakkwgkeeekrwftklnnleevavnqlknkeyktkidnfstdi
    lfssltaieimkedenrnlfdverireallkntldrdaigyvnftpkelginfsirdvel
    drdisdetldkvrqqiinqeytkfsfislglndnsinesvpvivktrvpttfdygvlndk
    etvslllnqgfsiipesaiittikgkdyiliegslsqeldfynkgseawgaenygdyisk
    lsheqlgalegylhsdykainsylrnnrvpnndelnkkielissalsvkpipqtliayrr
    vdgipfdlpsdfsfdkkengeiiadkqklnefidkwtgkeienlsfsstslkstpssfsk
    srfifrlrlsegaigafiygfsgfqdeqeillnknstfkifritpitsiinrvtkmtqvv
    idaegiqnkei
    

    Sequence, based on observed residues (ATOM records): (download)
    >2j3zD (D:)
    epidfinkpeseakkwgkeeekrwftklnnleevavnqlknkeyktkidnfstdilfssl
    taieimkedenrnlfdverireallkntldrdaigyvnftpkelginfsirdveldrdis
    detldkvrqqiinqeytkfsfislglndnsinesvpvivktrvpttfdygvlndketvsl
    llnqgfsiipesaiittikgkdyiliegslsqeldfynkgseawgaenygdyisklsheq
    lgalegylhsdykainsylrnnrvpnndelnkkielissalsvkpipqtliayrrvdgip
    fdlpsdfsfdkkengeiiadkqklnefidkwtgkeienlsfsstslkstpssfsksrfif
    rlrlsegaigafiygfsgfqdeqeillnknstfkifritpitsiinrvtkmtqvvidaeg
    i
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >2j3zE (E:)
    mpiikepidfinkpeseakkwgkeeekrwftklnnleevavnqlknkeyktkidnfstdi
    lfssltaieimkedenrnlfdverireallkntldrdaigyvnftpkelginfsirdvel
    drdisdetldkvrqqiinqeytkfsfislglndnsinesvpvivktrvpttfdygvlndk
    etvslllnqgfsiipesaiittikgkdyiliegslsqeldfynkgseawgaenygdyisk
    lsheqlgalegylhsdykainsylrnnrvpnndelnkkielissalsvkpipqtliayrr
    vdgipfdlpsdfsfdkkengeiiadkqklnefidkwtgkeienlsfsstslkstpssfsk
    srfifrlrlsegaigafiygfsgfqdeqeillnknstfkifritpitsiinrvtkmtqvv
    idaegiqnkei
    

    Sequence, based on observed residues (ATOM records): (download)
    >2j3zE (E:)
    epidfinkpeseakkwgkeeekrwftklnnleevavnqlknkeyktkidnfstdilfssl
    taieimkedenrnlfdverireallkntldrdaigyvnftpkelginfsirdveldrdis
    detldkvrqqiinqeytkfsfislglndnsinesvpvivktrvpttfdygvlndketvsl
    llnqgfsiipesaiittikgkdyiliegslsqeldfynkgseawgaenygdyisklsheq
    lgalegylhsdykainsylrnnrvpnndelnkkielissalsvkpipqtliayrrvdgip
    fdlpsdfsfdkkengeiiadkqklnefidkwtgkeienlsfsstslkstpssfsksrfif
    rlrlsegaigafiygfsgfqdeqeillnknstfkifritpitsiinrvtkmtqvvidaeg
    iqn
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >2j3zF (F:)
    mpiikepidfinkpeseakkwgkeeekrwftklnnleevavnqlknkeyktkidnfstdi
    lfssltaieimkedenrnlfdverireallkntldrdaigyvnftpkelginfsirdvel
    drdisdetldkvrqqiinqeytkfsfislglndnsinesvpvivktrvpttfdygvlndk
    etvslllnqgfsiipesaiittikgkdyiliegslsqeldfynkgseawgaenygdyisk
    lsheqlgalegylhsdykainsylrnnrvpnndelnkkielissalsvkpipqtliayrr
    vdgipfdlpsdfsfdkkengeiiadkqklnefidkwtgkeienlsfsstslkstpssfsk
    srfifrlrlsegaigafiygfsgfqdeqeillnknstfkifritpitsiinrvtkmtqvv
    idaegiqnkei
    

    Sequence, based on observed residues (ATOM records): (download)
    >2j3zF (F:)
    epidfinkpeseakkwgkeeekrwftklnnleevavnqlknkeyktkidnfstdilfssl
    taieimkedenrnlfdverireallkntldrdaigyvnftpkelginfsirdveldrdis
    detldkvrqqiinqeytkfsfislglndnsinesvpvivktrvpttfdygvlndketvsl
    llnqgfsiipesaiittikgkdyiliegslsqeldfynkgseawgaenygdyisklsheq
    lgalegylhsdykainsylrnnrvpnndelnkkielissalsvkpipqtliayrrvdgip
    fdlpsdfsfdkkengeiiadkqklnefidkwtgkeienlsfsstslkstpssfsksrfif
    rlrlsegaigafiygfsgfqdeqeillnknstfkifritpitsiinrvtkmtqvvidaeg
    i