SCOP 1.75: Structural Classification of Proteins

PDB entry 2j1k

View 2j1k on RCSB PDB site
Description: cav-2 fibre head in complex with car d1
Class: virus/receptor complex
Keywords: complex, membrane, receptor, palmitate, domain d1, immunoglobulin domain, host-virus interaction, glycoprotein, fiber protein, cell adhesion, phosphorylation, alternative splicing, virus/receptor complex, transmembrane, tight junction, coxsackievirus, fiber head, adenovirus, fibre head, lipoprotein, car, knob, fiber, fibre, cav-2, canine
Deposited on 2006-08-14, released 2006-09-05
The last revision prior to the SCOP 1.75 freeze date was dated 2006-11-01, with a file datestamp of 2007-06-28.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.172
AEROSPACI score: 0.46 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: coxsackievirus and adenovirus receptor
Species: HOMO SAPIENS
Database cross-references and differences (RAF-indexed):
- Uniprot P78310
Domains in SCOP 1.75: d2j1ka1
Chain 'B':
Compound: coxsackievirus and adenovirus receptor
Species: HOMO SAPIENS
Database cross-references and differences (RAF-indexed):
- Uniprot P78310
Domains in SCOP 1.75: d2j1kb1
Chain 'C':
Compound: fiber protein
Species: Canine adenovirus 2
Database cross-references and differences (RAF-indexed):
- Uniprot Q65914 (Start-196)
Domains in SCOP 1.75: d2j1kc1
Chain 'D':
Compound: fiber protein
Species: Canine adenovirus 2
Database cross-references and differences (RAF-indexed):
- Uniprot Q65914 (Start-196)
Domains in SCOP 1.75: d2j1kd1
Chain 'E':
Compound: fiber protein
Species: Canine adenovirus 2
Database cross-references and differences (RAF-indexed):
- Uniprot Q65914 (Start-196)
Domains in SCOP 1.75: d2j1ke1
Chain 'F':
Compound: fiber protein
Species: Canine adenovirus 2
Database cross-references and differences (RAF-indexed):
- Uniprot Q65914 (Start-196)
Domains in SCOP 1.75: d2j1kf1
Chain 'G':
Compound: coxsackievirus and adenovirus receptor
Species: HOMO SAPIENS
Database cross-references and differences (RAF-indexed):
- Uniprot P78310
Domains in SCOP 1.75: d2j1kg1
Chain 'H':
Compound: fiber protein
Species: Canine adenovirus 2
Database cross-references and differences (RAF-indexed):
- Uniprot Q65914 (Start-196)
Domains in SCOP 1.75: d2j1kh1
Chain 'I':
Compound: fiber protein
Species: Canine adenovirus 2
Database cross-references and differences (RAF-indexed):
- Uniprot Q65914 (Start-196)
Domains in SCOP 1.75: d2j1ki1
Chain 'J':
Compound: coxsackievirus and adenovirus receptor
Species: HOMO SAPIENS
Database cross-references and differences (RAF-indexed):
- Uniprot P78310
Domains in SCOP 1.75: d2j1kj1
Chain 'K':
Compound: coxsackievirus and adenovirus receptor
Species: HOMO SAPIENS
Database cross-references and differences (RAF-indexed):
- Uniprot P78310
Domains in SCOP 1.75: d2j1kk1
Chain 'L':
Compound: fiber protein
Species: Canine adenovirus 2
Database cross-references and differences (RAF-indexed):
- Uniprot Q65914 (Start-196)
Domains in SCOP 1.75: d2j1kl1
Chain 'M':
Compound: fiber protein
Species: Canine adenovirus 2
Database cross-references and differences (RAF-indexed):
- Uniprot Q65914 (Start-196)
Domains in SCOP 1.75: d2j1km1
Chain 'N':
Compound: fiber protein
Species: Canine adenovirus 2
Database cross-references and differences (RAF-indexed):
- Uniprot Q65914 (Start-196)
Domains in SCOP 1.75: d2j1kn1
Chain 'O':
Compound: coxsackievirus and adenovirus receptor
Species: HOMO SAPIENS
Database cross-references and differences (RAF-indexed):
- Uniprot P78310
Domains in SCOP 1.75: d2j1ko1
Chain 'P':
Compound: coxsackievirus and adenovirus receptor
Species: HOMO SAPIENS
Database cross-references and differences (RAF-indexed):
- Uniprot P78310
Domains in SCOP 1.75: d2j1kp1
Chain 'Q':
Compound: fiber protein
Species: Canine adenovirus 2
Database cross-references and differences (RAF-indexed):
- Uniprot Q65914 (Start-196)
Domains in SCOP 1.75: d2j1kq1
Chain 'R':
Compound: fiber protein
Species: Canine adenovirus 2
Database cross-references and differences (RAF-indexed):
- Uniprot Q65914 (Start-196)
Domains in SCOP 1.75: d2j1kr1
Chain 'S':
Compound: fiber protein
Species: Canine adenovirus 2
Database cross-references and differences (RAF-indexed):
- Uniprot Q65914 (Start-196)
Domains in SCOP 1.75: d2j1ks1
Chain 'T':
Compound: coxsackievirus and adenovirus receptor
Species: HOMO SAPIENS
Database cross-references and differences (RAF-indexed):
- Uniprot P78310
Domains in SCOP 1.75: d2j1kt1
Chain 'V':
Compound: coxsackievirus and adenovirus receptor
Species: HOMO SAPIENS
Database cross-references and differences (RAF-indexed):
- Uniprot P78310
Domains in SCOP 1.75: d2j1kv1
Chain 'X':
Compound: coxsackievirus and adenovirus receptor
Species: HOMO SAPIENS
Database cross-references and differences (RAF-indexed):
- Uniprot P78310
Domains in SCOP 1.75: d2j1kx1
Chain 'Y':
Compound: coxsackievirus and adenovirus receptor
Species: HOMO SAPIENS
Database cross-references and differences (RAF-indexed):
- Uniprot P78310
Domains in SCOP 1.75: d2j1ky1
Chain 'Z':
Compound: coxsackievirus and adenovirus receptor
Species: HOMO SAPIENS
Database cross-references and differences (RAF-indexed):
- Uniprot P78310
Domains in SCOP 1.75: d2j1kz1
Heterogens: HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>2j1kA (A:)
madfarslsittpeemiekakgetaylpckftlspedqgpldiewlispadnqkvdqvii
lysgdkiyddyypdlkgrvhftsndlksgdasinvtnlqlsdigtyqckvkkapgvankk
ihlvvlvk