PDB entry 2j12

View 2j12 on RCSB PDB site
Description: ad37 fibre head in complex with car d1
Class: viral protein/receptor
Keywords: viral protein/receptor, car, ad37, x-ray, had37, complex, membrane, receptor, coxsackievirus, phosphorylation, alternative splicing, immunoglobulin domain, host-virus interaction, cell adhesion, transmembrane, tight junction, palmitate, adenovirus, lipoprotein, glycoprotein, viral protein/receptor complex
Deposited on 2006-08-08, released 2006-08-29
The last revision prior to the SCOPe 2.02 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.5 Å
R-factor: 0.149
AEROSPACI score: 0.66 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: fiber protein
    Species: HUMAN ADENOVIRUS [TaxId:52275]
    Database cross-references and differences (RAF-indexed):
    • PDB 2J12
    • Uniprot Q64823 (Start-193)
    Domains in SCOPe 2.02: d2j12a_
  • Chain 'B':
    Compound: coxsackievirus and adenovirus receptor
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d2j12b_
  • Heterogens: CA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2j12A (A:)
gamgswnpkydtrtlwttpdtspnctiaqdkdskltlvltkcgsqilanvslivvagkyh
iinnktnpkiksftikllfnkngvlldnsnlgkaywnfrsgnsnvstayekaigfmpnlv
aypkpsnskkyardivygtiylggkpdqpavikttfnqetgceysitfnfswsktyenve
fettsftfsyiaqe

    Sequence, based on observed residues (ATOM records): (download) 
    >2j12A (A:)
rtlwttpdtspnctiaqdkdskltlvltkcgsqilanvslivvagkyhiinnktnpkiks
ftikllfnkngvlldnsnlgkaywnfrsgnsnvstayekaigfmpnlvaypkpsnskkya
rdivygtiylggkpdqpavikttfnqetgceysitfnfswsktyenvefettsftfsyia
qe

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2j12B (B:)
madfarslsittpeemiekakgetaylpckftlspedqgpldiewlispadnqkvdqvii
lysgdkiyddyypdlkgrvhftsndlksgdasinvtnlqlsdigtyqckvkkapgvankk
ihlvvlvk

    Sequence, based on observed residues (ATOM records): (download) 
    >2j12B (B:)
slsittpeemiekakgetaylpckftlspedqgpldiewlispadnqkvdqviilysgdk
iyddyypdlkgrvhftsndlksgdasinvtnlqlsdigtyqckvkkapgvankkihlvvl