PDB entry 2j0t
View 2j0t on RCSB PDB site
Description: crystal structure of the catalytic domain of mmp-1 in complex with the inhibitory domain of timp-1
Class: hydrolase
Keywords: extracellular matrix, erythrocyte maturation, metalloprotease, collagen degradation, zinc, calcium, ob fold, zymogen, protease, hydrolase, metalloenzyme inhibitor, metalloprotease inhibitor, matrix metalloprotease, autocatalytic cleavage, collagenase, polymorphism, glycoprotein, metal-binding, tissue inhibitor of metalloproteinase
Deposited on
2006-08-04, released
2006-10-18
The last revision prior to the SCOP 1.75 freeze date was dated
2007-01-03, with a file datestamp of
2007-06-28.
Experiment type: XRAY
Resolution: 2.54 Å
R-factor: 0.249
AEROSPACI score: 0.31
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: interstitial collagenase
Species: HOMO SAPIENS
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d2j0ta1 - Chain 'B':
Compound: interstitial collagenase
Species: HOMO SAPIENS
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d2j0tb1 - Chain 'C':
Compound: interstitial collagenase
Species: HOMO SAPIENS
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d2j0tc1 - Chain 'D':
Compound: Metalloproteinase inhibitor 1
Species: HOMO SAPIENS
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d2j0td1 - Chain 'E':
Compound: Metalloproteinase inhibitor 1
Species: HOMO SAPIENS
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d2j0te1 - Chain 'F':
Compound: Metalloproteinase inhibitor 1
Species: HOMO SAPIENS
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d2j0tf1 - Heterogens: ZN, CA, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2j0tA (A:)
mvltegnprweqthltyrienytpdlpradvdhaiekafqlwsnvtpltftkvsegqadi
misfvrgdhrdnspfdgpggnlahafqpgpgiggdahfdederwtnnfreynlhrvaahe
lghslglshstdigalmypsytfsgdvqlaqddidgiqaiygrsqnpvqp
Sequence, based on observed residues (ATOM records): (download)
>2j0tA (A:)
gnprweqthltyrienytpdlpradvdhaiekafqlwsnvtpltftkvsegqadimisfv
rgdhrdnspfdgpggnlahafqpgpgiggdahfdederwtnnfreynlhrvaahelghsl
glshstdigalmypsytfsgdvqlaqddidgiqaiygrsqn
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2j0tB (B:)
mvltegnprweqthltyrienytpdlpradvdhaiekafqlwsnvtpltftkvsegqadi
misfvrgdhrdnspfdgpggnlahafqpgpgiggdahfdederwtnnfreynlhrvaahe
lghslglshstdigalmypsytfsgdvqlaqddidgiqaiygrsqnpvqp
Sequence, based on observed residues (ATOM records): (download)
>2j0tB (B:)
gnprweqthltyrienytpdlpradvdhaiekafqlwsnvtpltftkvsegqadimisfv
rgdhrdnspfdgpggnlahafqpgpgiggdahfdederwtnnfreynlhrvaahelghsl
glshstdigalmypsytfsgdvqlaqddidgiqaiygrsqnp
- Chain 'C':
Sequence, based on SEQRES records: (download)
>2j0tC (C:)
mvltegnprweqthltyrienytpdlpradvdhaiekafqlwsnvtpltftkvsegqadi
misfvrgdhrdnspfdgpggnlahafqpgpgiggdahfdederwtnnfreynlhrvaahe
lghslglshstdigalmypsytfsgdvqlaqddidgiqaiygrsqnpvqp
Sequence, based on observed residues (ATOM records): (download)
>2j0tC (C:)
gnprweqthltyrienytpdlpradvdhaiekafqlwsnvtpltftkvsegqadimisfv
rgdhrdnspfdgpggnlahafqpgpgiggdahfdederwtnnfreynlhrvaahelghsl
glshstdigalmypsytfsgdvqlaqddidgiqaiygrs
- Chain 'D':
Sequence, based on SEQRES records: (download)
>2j0tD (D:)
ctcvpphpqtafcnsdlvirakfvgtpevnqttlyqryeikmtkmykgfqalgdaadirf
vytpamesvcgyfhrshnrseefliagklqdgllhittcsfvapwnslslaqrrgftkty
tvgcee
Sequence, based on observed residues (ATOM records): (download)
>2j0tD (D:)
ctcvpphpqtafcnsdlvirakfvgtpevnqttlyqryeikmtkmykgfqalgdaadirf
vytpamesvcgyfhrshnrseefliagklqdgllhittcsfvapwnslslaqrrgftkty
tvgc
- Chain 'E':
Sequence, based on SEQRES records: (download)
>2j0tE (E:)
ctcvpphpqtafcnsdlvirakfvgtpevnqttlyqryeikmtkmykgfqalgdaadirf
vytpamesvcgyfhrshnrseefliagklqdgllhittcsfvapwnslslaqrrgftkty
tvgcee
Sequence, based on observed residues (ATOM records): (download)
>2j0tE (E:)
ctcvpphpqtafcnsdlvirakfvgtpevnqttlyqryeikmtkmykgfqalgdaadirf
vytpamesvcgyfhrshnrseefliagklqdgllhittcsfvapwnslslaqrrgftkty
tvgc
- Chain 'F':
Sequence, based on SEQRES records: (download)
>2j0tF (F:)
ctcvpphpqtafcnsdlvirakfvgtpevnqttlyqryeikmtkmykgfqalgdaadirf
vytpamesvcgyfhrshnrseefliagklqdgllhittcsfvapwnslslaqrrgftkty
tvgcee
Sequence, based on observed residues (ATOM records): (download)
>2j0tF (F:)
ctcvpphpqtafcnsdlvirakfvgtpevnqttlyqryeikmtkmykgfqalgdaadirf
vytpamesvcgyfhrshnrseefliagklqdgllhittcsfvapwnslslaqrrgftkty
tvgc