PDB entry 2irp
View 2irp on RCSB PDB site
Description: Crystal structure of the l-fuculose-1-phosphate aldolase (aq_1979) from aquifex aeolicus VF5
Class: lyase
Keywords: aldolase, aldehyde, enzymatic mechanism, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, LYASE
Deposited on
2006-10-16, released
2007-10-30
The last revision prior to the SCOPe 2.08 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.2
AEROSPACI score: 0.33
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Putative aldolase class 2 protein aq_1979
Species: Aquifex aeolicus [TaxId:224324]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2irpa_ - Chain 'B':
Compound: Putative aldolase class 2 protein aq_1979
Species: Aquifex aeolicus [TaxId:224324]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2irpb_ - Heterogens: CL, BME, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2irpA (A:)
mnvelfkkfsekveeiieagrilhsrgwvpatsgnisakvseeyiaitasgkhkgkltpe
dillidyegrpvgggkpsaetllhttvyklfpevnavvhthspnatvisivekkdfvele
dyellkafpdihthevkikipifpneqnipllakevenyfktsedkygflirghglytwg
rsmeealihtealefifecelkllsfhs
Sequence, based on observed residues (ATOM records): (download)
>2irpA (A:)
nvelfkkfsekveeiieagrilhsrgwvpatsgnisakvseeyiaitasgkhkgkltped
illidyegrpvgggkpsaetllhttvyklfpevnavvhthspnatvisivekkdfveled
yellkafpdihthevkikipifpneqnipllakevenyfktsedkygflirghglytwgr
smeealihtealefifecelkllsfh
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2irpB (B:)
mnvelfkkfsekveeiieagrilhsrgwvpatsgnisakvseeyiaitasgkhkgkltpe
dillidyegrpvgggkpsaetllhttvyklfpevnavvhthspnatvisivekkdfvele
dyellkafpdihthevkikipifpneqnipllakevenyfktsedkygflirghglytwg
rsmeealihtealefifecelkllsfhs
Sequence, based on observed residues (ATOM records): (download)
>2irpB (B:)
nvelfkkfsekveeiieagrilhsrgwvpatsgnisakvseeyiaitasgkhkgkltped
illidyegrpvgggkpsaetllhttvyklfpevnavvhthspnatvisivekkdfveled
yellkafpdihthevkikipifpneqnipllakevenyfktsedkygflirghglytwgr
smeealihtealefifecelkllsf