PDB entry 2iou

View 2iou on RCSB PDB site
Description: Major Tropism Determinant P1 (Mtd-P1) Variant Complexed with Bordetella brochiseptica Virulence Factor Pertactin extracellular domain (Prn-E).
Class: viral protein/membrane protein
Keywords: Mtd; Prn; pertactin, viral protein-membrane protein COMPLEX
Deposited on 2006-10-10, released 2007-10-23
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-10-18, with a file datestamp of 2017-10-13.
Experiment type: XRAY
Resolution: 3.16 Å
R-factor: N/A
AEROSPACI score: 0.11 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Major Tropism Determinant P1
    Species: Bordetella phage BPP-1 [TaxId:194699]
    Gene: mtd
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2ioua1, d2ioua2
  • Chain 'B':
    Compound: Major Tropism Determinant P1
    Species: Bordetella phage BPP-1 [TaxId:194699]
    Gene: mtd
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2ioub1, d2ioub2
  • Chain 'C':
    Compound: Major Tropism Determinant P1
    Species: Bordetella phage BPP-1 [TaxId:194699]
    Gene: mtd
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2iouc1, d2iouc2
  • Chain 'D':
    Compound: Major Tropism Determinant P1
    Species: Bordetella phage BPP-1 [TaxId:194699]
    Gene: mtd
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2ioud1, d2ioud2
  • Chain 'E':
    Compound: Major Tropism Determinant P1
    Species: Bordetella phage BPP-1 [TaxId:194699]
    Gene: mtd
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2ioue1, d2ioue2
  • Chain 'F':
    Compound: Major Tropism Determinant P1
    Species: Bordetella phage BPP-1 [TaxId:194699]
    Gene: mtd
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2iouf1, d2iouf2
  • Chain 'G':
    Compound: Pertactin Extracellular Domain
    Species: Bordetella bronchiseptica [TaxId:257310]
    Gene: Prn
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2ioug_
  • Chain 'H':
    Compound: Pertactin Extracellular Domain
    Species: Bordetella bronchiseptica [TaxId:257310]
    Gene: Prn
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2iouh_
  • Heterogens: MG

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2iouA (A:)
vqfrggttaqhatftgaareitvdtdkntvvvhdgataggfplarhdlvktafikadksa
vaftrtgnatasikagtivevngklvqftadtaitmpaltagtdyaiyvcddgtvradsn
fsaptgytsttarkvggfhyapgsnaaaqaggnttaqineyslwdikfrpaaldprgmtl
vagafwadiyllgvnhltdgtskynvtiadgsaspkkstkfggdgsaaysdgawynfaev
mthhgkrlpnynefqalafgtteatssggtdvpttgvngtgatsawniftskwgvvqasg
clwtwgnefggvngaseytantggrgsvyaqpaaalfggawngtslsgsraalwysgpsf
sfaffgargvcdhlil

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2iouB (B:)
vqfrggttaqhatftgaareitvdtdkntvvvhdgataggfplarhdlvktafikadksa
vaftrtgnatasikagtivevngklvqftadtaitmpaltagtdyaiyvcddgtvradsn
fsaptgytsttarkvggfhyapgsnaaaqaggnttaqineyslwdikfrpaaldprgmtl
vagafwadiyllgvnhltdgtskynvtiadgsaspkkstkfggdgsaaysdgawynfaev
mthhgkrlpnynefqalafgtteatssggtdvpttgvngtgatsawniftskwgvvqasg
clwtwgnefggvngaseytantggrgsvyaqpaaalfggawngtslsgsraalwysgpsf
sfaffgargvcdhlil

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2iouC (C:)
vqfrggttaqhatftgaareitvdtdkntvvvhdgataggfplarhdlvktafikadksa
vaftrtgnatasikagtivevngklvqftadtaitmpaltagtdyaiyvcddgtvradsn
fsaptgytsttarkvggfhyapgsnaaaqaggnttaqineyslwdikfrpaaldprgmtl
vagafwadiyllgvnhltdgtskynvtiadgsaspkkstkfggdgsaaysdgawynfaev
mthhgkrlpnynefqalafgtteatssggtdvpttgvngtgatsawniftskwgvvqasg
clwtwgnefggvngaseytantggrgsvyaqpaaalfggawngtslsgsraalwysgpsf
sfaffgargvcdhlil

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2iouD (D:)
vqfrggttaqhatftgaareitvdtdkntvvvhdgataggfplarhdlvktafikadksa
vaftrtgnatasikagtivevngklvqftadtaitmpaltagtdyaiyvcddgtvradsn
fsaptgytsttarkvggfhyapgsnaaaqaggnttaqineyslwdikfrpaaldprgmtl
vagafwadiyllgvnhltdgtskynvtiadgsaspkkstkfggdgsaaysdgawynfaev
mthhgkrlpnynefqalafgtteatssggtdvpttgvngtgatsawniftskwgvvqasg
clwtwgnefggvngaseytantggrgsvyaqpaaalfggawngtslsgsraalwysgpsf
sfaffgargvcdhlil

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2iouE (E:)
vqfrggttaqhatftgaareitvdtdkntvvvhdgataggfplarhdlvktafikadksa
vaftrtgnatasikagtivevngklvqftadtaitmpaltagtdyaiyvcddgtvradsn
fsaptgytsttarkvggfhyapgsnaaaqaggnttaqineyslwdikfrpaaldprgmtl
vagafwadiyllgvnhltdgtskynvtiadgsaspkkstkfggdgsaaysdgawynfaev
mthhgkrlpnynefqalafgtteatssggtdvpttgvngtgatsawniftskwgvvqasg
clwtwgnefggvngaseytantggrgsvyaqpaaalfggawngtslsgsraalwysgpsf
sfaffgargvcdhlil

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2iouF (F:)
vqfrggttaqhatftgaareitvdtdkntvvvhdgataggfplarhdlvktafikadksa
vaftrtgnatasikagtivevngklvqftadtaitmpaltagtdyaiyvcddgtvradsn
fsaptgytsttarkvggfhyapgsnaaaqaggnttaqineyslwdikfrpaaldprgmtl
vagafwadiyllgvnhltdgtskynvtiadgsaspkkstkfggdgsaaysdgawynfaev
mthhgkrlpnynefqalafgtteatssggtdvpttgvngtgatsawniftskwgvvqasg
clwtwgnefggvngaseytantggrgsvyaqpaaalfggawngtslsgsraalwysgpsf
sfaffgargvcdhlil

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >2iouG (G:)
dwnnqsiikagerqhgihikqsdgagvrtatgttikvsgrqaqgvllenpaaelrfqngs
vtssgqlfdegvrrflgtvtvkagklvadhatlanvsdtrdddgialyvageqaqasiad
stlqgaggvrverganvtvqrstivdgglhigtlqplqpedlppsrvvlgdtsvtavpas
gapaavsvfganeltvdgghitggraagvaamdgaivhlqratirrgdapaggavpggav
pggavpggfgplldgwygvdvsdstvdlaqsiveapqlgaairagrgarvtvsggslsap
hgnvietgggarrfpppasplsitlqagaraqgrallyrvlpepvkltlaggaqgqgdiv
atelppipgassgpldvalasqarwtgatravdslsidnatwvmtdnsnvgalrlasdgs
vdfqqpaeagrfkvlmvdtlagsglfrmnvfadlglsdklvvmrdasgqhrlwvrnsgse
pasantmllvqtprgsaatftlankdgkvdigtyryrlaangngqwslvgakapp

    Sequence, based on observed residues (ATOM records): (download) 
    >2iouG (G:)
dwnnqsiikagerqhgihikqsdgagvrtatgttikvsgrqaqgvllenpaaelrfqngs
vtssgqlfdegvrrflgtvtvkagklvadhatlanvsdtrdddgialyvageqaqasiad
stlqgaggvrverganvtvqrstivdgglhigtlqplqpedlppsrvvlgdtsvtavpas
gapaavsvfganeltvdgghitggraagvaamdgaivhlqratirrggwygvdvsdstvd
laqsiveapqlgaairagrgarvtvsggslsaphgnvietgggarrfpppasplsitlqa
garaqgrallyrvlpepvkltlaggaqgqgdivatelppipgassgpldvalasqarwtg
atravdslsidnatwvmtdnsnvgalrlasdgsvdfqqpaeagrfkvlmvdtlagsglfr
mnvfadlglsdklvvmrdasgqhrlwvrnsgsepasantmllvqtprgsaatftlankdg
kvdigtyryrlaangngqwslvgakapp

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >2iouH (H:)
dwnnqsiikagerqhgihikqsdgagvrtatgttikvsgrqaqgvllenpaaelrfqngs
vtssgqlfdegvrrflgtvtvkagklvadhatlanvsdtrdddgialyvageqaqasiad
stlqgaggvrverganvtvqrstivdgglhigtlqplqpedlppsrvvlgdtsvtavpas
gapaavsvfganeltvdgghitggraagvaamdgaivhlqratirrgdapaggavpggav
pggavpggfgplldgwygvdvsdstvdlaqsiveapqlgaairagrgarvtvsggslsap
hgnvietgggarrfpppasplsitlqagaraqgrallyrvlpepvkltlaggaqgqgdiv
atelppipgassgpldvalasqarwtgatravdslsidnatwvmtdnsnvgalrlasdgs
vdfqqpaeagrfkvlmvdtlagsglfrmnvfadlglsdklvvmrdasgqhrlwvrnsgse
pasantmllvqtprgsaatftlankdgkvdigtyryrlaangngqwslvgakapp

    Sequence, based on observed residues (ATOM records): (download) 
    >2iouH (H:)
dwnnqsiikagerqhgihikqsdgagvrtatgttikvsgrqaqgvllenpaaelrfqngs
vtssgqlfdegvrrflgtvtvkagklvadhatlanvsdtrdddgialyvageqaqasiad
stlqgaggvrverganvtvqrstivdgglhigtlqplqpedlppsrvvlgdtsvtavpas
gapaavsvfganeltvdgghitggraagvaamdgaivhlqratirrggwygvdvsdstvd
laqsiveapqlgaairagrgarvtvsggslsaphgnvietgggarrfpppasplsitlqa
garaqgrallyrvlpepvkltlaggaqgqgdivatelppipgassgpldvalasqarwtg
atravdslsidnatwvmtdnsnvgalrlasdgsvdfqqpaeagrfkvlmvdtlagsglfr
mnvfadlglsdklvvmrdasgqhrlwvrnsgsepasantmllvqtprgsaatftlankdg
kvdigtyryrlaangngqwslvgakapp