PDB entry 2io2
View 2io2 on RCSB PDB site
Description: Crystal structure of human Senp2 in complex with RanGAP1-SUMO-1
Class: protein binding, hydrolase
Keywords: SUMO, Ubiquitin, Senp, Ulp, complex, PROTEIN BINDING, HYDROLASE
Deposited on
2006-10-09, released
2006-11-21
The last revision prior to the SCOPe 2.07 freeze date was dated
2017-10-18, with a file datestamp of
2017-10-13.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: N/A
AEROSPACI score: 0.13
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Sentrin-specific protease 2
Species: Homo sapiens [TaxId:9606]
Gene: SENP2, KIAA1331
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d2io2a_ - Chain 'B':
Compound: Small ubiquitin-related modifier 1
Species: Homo sapiens [TaxId:9606]
Gene: SUMO1, SMT3C, SMT3H3, UBL1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d2io2b_ - Chain 'C':
Compound: ran gtpase-activating protein 1
Species: Homo sapiens [TaxId:9606]
Gene: RANGAP1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d2io2c1 - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2io2A (A:)
gshmasdlleltedmekeisnalghgpqdeilssafklritrgdiqtlknyhwlndevin
fymnllvernkkqgypalhvfstffypklksggyqavkrwtkgvnlfeqeiilvpihrkv
hwslvvidlrkkclkyldsmgqkghriceillqylqdesktkrnsdlnllewthhsmkph
eipqqlngsdsgmftckyadyisrdkpitftqhqmplfrkkmvweilhqqll
Sequence, based on observed residues (ATOM records): (download)
>2io2A (A:)
lleltedmekeisnalghgpqdeilssafklritrgdiqtlknyhwlndevinfymnllv
ernkkqgypalhvfstffypklksggyqavkrwtkgvnlfeqeiilvpihrkvhwslvvi
dlrkkclkyldsmgqkghriceillqylqdesktkrnsdlnllewthhsmkpheipqqln
gsdsgmftckyadyisrdkpitftqhqmplfrkkmvweilhqqll
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2io2B (B:)
mgegeyiklkvigqdsseihfkvkmtthlkklkesycqrqgvpmnslrflfegqriadnh
tpkelgmeeedvievyqeqtgg
Sequence, based on observed residues (ATOM records): (download)
>2io2B (B:)
klkvigqdsseihfkvkmtthlkklkesycqrqgvpmnslrflfegqriadnhtpkelgm
eeedvievyqeqtgg
- Chain 'C':
Sequence, based on SEQRES records: (download)
>2io2C (C:)
slntgepapvlsspppadvstflafpspekllrlgpkssvliaqqtdtsdpekvvsaflk
vssvfkdeatvrmavqdavdalmqkafnsssfnsntfltrllvhmgllksedkvkaianl
ygplmalnhmvqqdyfpkalaplllafvtkpnsalesssfarhsllqtlykv
Sequence, based on observed residues (ATOM records): (download)
>2io2C (C:)
advstflafpspekllrlgpkssvliaqqtdtsdpekvvsaflkvssvfkdeatvrmavq
davdalmqkafnsssfnsntfltrllvhmgllksedkvkaianlygplmalnhmvqqdyf
pkalaplllafvtkpnsalesssfarhsllqtlykv