PDB entry 2if9

View 2if9 on RCSB PDB site
Description: Crystal Structure of SV40 T-antigen origin binding domain disulfide-linked dimer
Class: viral protein
Keywords: origin binding domain, VIRAL PROTEIN
Deposited on 2006-09-20, released 2007-02-13
The last revision prior to the SCOPe 2.05 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-19.
Experiment type: XRAY
Resolution: 2.59 Å
R-factor: 0.208
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: large t antigen
    Species: Simian virus 40 [TaxId:10633]
    Gene: large T-antigen
    Database cross-references and differences (RAF-indexed):
    • Uniprot P03070 (2-131)
      • cloning artifact (0-1)
    Domains in SCOPe 2.05: d2if9a_
  • Chain 'B':
    Compound: large t antigen
    Species: Simian virus 40 [TaxId:10633]
    Gene: large T-antigen
    Database cross-references and differences (RAF-indexed):
    • Uniprot P03070 (2-131)
      • cloning artifact (1)
    Domains in SCOPe 2.05: d2if9b_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2if9A (A:)
gskvedpkdfpsellsflshavfsnrtlacfaiyttkekaallykkimekysvtfisrhn
synhnilffltphrhrvsainnyaqklctfsflickgvnkeylmysaltrdpfsvieesl
pgglkehdfnpess

    Sequence, based on observed residues (ATOM records): (download) 
    >2if9A (A:)
gskvedpkdfpsellsflshavfsnrtlacfaiyttkekaallykkimekysvtfisrhn
synhnilffltphrhrvsainnyaqklctfsflickgvnkeylmysaltrdpfsvieesl
pgglkehdfnpe

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2if9B (B:)
gskvedpkdfpsellsflshavfsnrtlacfaiyttkekaallykkimekysvtfisrhn
synhnilffltphrhrvsainnyaqklctfsflickgvnkeylmysaltrdpfsvieesl
pgglkehdfnpess

    Sequence, based on observed residues (ATOM records): (download) 
    >2if9B (B:)
skvedpkdfpsellsflshavfsnrtlacfaiyttkekaallykkimekysvtfisrhns
ynhnilffltphrhrvsainnyaqklctfsflickgvnkeylmysaltrdpfsvieeslp
gglkehdfnpe