PDB entry 2icy

View 2icy on RCSB PDB site
Description: Crystal Structure of a Putative UDP-glucose Pyrophosphorylase from Arabidopsis Thaliana with Bound UDP-glucose
Class: transferase
Keywords: At3g03250, UDP, putative UDP-glucose pyrophosphorylase, Structural Genomics Functional Follow-up Study, Structural Genomics, Protein Structure Initiative, PSI, CESG, Center for Eukaryotic Structural Genomics, TRANSFERASE
Deposited on 2006-09-13, released 2006-10-03
The last revision prior to the SCOP 1.75 freeze date was dated 2008-07-22, with a file datestamp of 2008-07-18.
Experiment type: XRAY
Resolution: 1.64 Å
R-factor: 0.183
AEROSPACI score: 0.62 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Probable UTP-glucose-1-phosphate uridylyltransferase 2
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: At3g03250, T17B22.6
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2icya1, d2icya2
  • Chain 'B':
    Compound: Probable UTP-glucose-1-phosphate uridylyltransferase 2
    Species: Arabidopsis thaliana [TaxId:3702]
    Gene: At3g03250, T17B22.6
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2icyb1, d2icyb2
  • Heterogens: DMS, UPG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >2icyA (A:)
    saattenlpqlksavdgltemseseksgfislvsrylsgeaqhiewskiqtptdeivvpy
    ekmtpvsqdvaetknlldklvvlklngglgttmgctgpksvievrdgltfldliviqien
    lnnkygckvplvlmnsfnthddthkivekytnsnvdihtfnqskyprvvadefvpwpskg
    ktdkegwyppghgdvfpalmnsgkldtflsqgkeyvfvansdnlgaivdltilkhliqnk
    neycmevtpktladvkggtlisyegkvqlleiaqvpdehvnefksiekfkifntnnlwvn
    lkaikklveadalkmeiipnpkevdgvkvlqletaagaairffdnaigvnvprsrflpvk
    assdlllvqsdlytlvdgfvtrnkartnpsnpsielgpefkkvatflsrfksipsiveld
    slkvsgdvwfgssivlkgkvtvaaksgvkleipdravvenkningpedl
    

    Sequence, based on observed residues (ATOM records): (download)
    >2icyA (A:)
    tenlpqlksavdgltemseseksgfislvsryliewskiqtptdeivvpyekmtpvsqdv
    aetknlldklvvlklngglgttmgctgpksvievrdgltfldliviqienlnnkygckvp
    lvlmnsfnthddthkivekytnsnvdihtfnqskyprvvadefvpwpskgktdkegwypp
    ghgdvfpalmnsgkldtflsqgkeyvfvansdnlgaivdltilkhliqnkneycmevtpk
    tladvkggtlisyegkvqlleiaqvpdehvnefksiekfkifntnnlwvnlkaikklvea
    dalkmeiipnpkevdgvkvlqletaagaairffdnaigvnvprsrflpvkassdlllvqs
    dlytlvdgfvtrnkartnpsnpsielgpefkkvatflsrfksipsiveldslkvsgdvwf
    gssivlkgkvtvaaksgvkleipdravvenkningp
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >2icyB (B:)
    saattenlpqlksavdgltemseseksgfislvsrylsgeaqhiewskiqtptdeivvpy
    ekmtpvsqdvaetknlldklvvlklngglgttmgctgpksvievrdgltfldliviqien
    lnnkygckvplvlmnsfnthddthkivekytnsnvdihtfnqskyprvvadefvpwpskg
    ktdkegwyppghgdvfpalmnsgkldtflsqgkeyvfvansdnlgaivdltilkhliqnk
    neycmevtpktladvkggtlisyegkvqlleiaqvpdehvnefksiekfkifntnnlwvn
    lkaikklveadalkmeiipnpkevdgvkvlqletaagaairffdnaigvnvprsrflpvk
    assdlllvqsdlytlvdgfvtrnkartnpsnpsielgpefkkvatflsrfksipsiveld
    slkvsgdvwfgssivlkgkvtvaaksgvkleipdravvenkningpedl
    

    Sequence, based on observed residues (ATOM records): (download)
    >2icyB (B:)
    nlpqlksavdgltemseseksgfislvsrylsgeaqhiewskiqtptdeivvpyekmtpv
    sqdvaetknlldklvvlklngglgttmgctgpksvievrdgltfldliviqienlnnkyg
    ckvplvlmnsfnthddthkivekytnsnvdihtfnqskyprvvadefvpwpskgktdkeg
    wyppghgdvfpalmnsgkldtflsqgkeyvfvansdnlgaivdltilkhliqnkneycme
    vtpktladvkggtlisyegkvqlleiaqvpdehvnefksiekfkifntnnlwvnlkaikk
    lveadalkmeiipnpkevdgvkvlqletaagaairffdnaigvnvprsrflpvkassdll
    lvqsdlytlvdgfvtrnkartnpsnpsielgpefkkvatflsrfksipsiveldslkvsg
    dvwfgssivlkgkvtvaaksgvkleipdravvenkningpedl