PDB entry 2i9g
View 2i9g on RCSB PDB site
Description: DNA Polymerase Beta with a Benzo[c]phenanthrene diol epoxide adducted guanine base
Class: Transferase/DNA
Keywords: Mutagenesis, Base Excision Repair, Nucleotidyl Transferase, DNA Adduct, Transferase/DNA COMPLEX
Deposited on
2006-09-05, released
2006-10-24
The last revision prior to the SCOPe 2.08 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.2
AEROSPACI score: 0.42
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: DNA polymerase beta
Species: Homo sapiens [TaxId:9606]
Gene: POLB
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2i9ga1, d2i9ga2, d2i9ga3 - Chain 'D':
Compound: 5'-d(p*gp*tp*cp*gp*g)-3'
- Chain 'P':
Compound: 5'-d(*gp*cp*tp*gp*ap*tp*gp*cp*gp*c)-3'
- Chain 'T':
Compound: 5'-d(*cp*cp*gp*ap*cp*gp*gp*cp*gp*cp*ap*tp*cp*ap*gp*c)-3'
- Heterogens: NA, CL, BPI, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2i9gA (A:)
mskrkapqetlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeak
klpgvgtkiaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegik
tledlrknedklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgs
frrgaessgdmdvllthpsftsestkqpkllhqvveqlqkvhfitdtlskgetkfmgvcq
lpskndekeyphrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirp
lgvtgvageplpvdsekdifdyiqwkyrepkdrse
Sequence, based on observed residues (ATOM records): (download)
>2i9gA (A:)
etlnggitdmltelanfeknvsqaihkynayrkaasviakyphkiksgaeakklpgvgtk
iaekideflatgklrklekirqddtsssinfltrvsgigpsaarkfvdegiktledlrkn
edklnhhqriglkyfgdfekripreemlqmqdivlnevkkvdseyiatvcgsfrrgaess
gdmdvllthpsftsesqpkllhqvveqlqkvhfitdtlskgetkfmgvcqlpskndekey
phrridirlipkdqyycgvlyftgsdifnknmrahalekgftineytirplgvtgvagep
lpvdsekdifdyiqwkyrepkdrse
- Chain 'D':
No sequence available.
- Chain 'P':
No sequence available.
- Chain 'T':
No sequence available.