SCOPe 2.08: Structural Classification of Proteins

PDB entry 2i3o

View 2i3o on RCSB PDB site
Description: Crystal structure of gamma-glutamyl transferase related protein from Thermoplasma acidophilum
Class: transferase
Keywords: Gamma-glutamyl transferase related protein, Thermoplasma acidophilum, 6324d, Structural Genomics, PSI, Protein Structure Initiative, New York SGX Research Center for Structural Genomics, NYSGXRC, TRANSFERASE
Deposited on 2006-08-19, released 2006-08-29
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-02-03, with a file datestamp of 2021-01-29.
Experiment type: XRAY
Resolution: 2.03 Å
R-factor: N/A
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: Gamma-glutamyltransferase related protein
Species: Thermoplasma acidophilum [TaxId:2303]
Database cross-references and differences (RAF-indexed):
- Uniprot Q9HJH4 (0-515)
  - modified residue (0)
  - modified residue (45)
  - modified residue (72)
  - modified residue (92)
  - modified residue (125)
  - modified residue (170)
  - modified residue (194)
  - modified residue (266)
  - modified residue (276)
  - modified residue (288)
  - modified residue (304)
  - modified residue (351)
  - modified residue (384)
  - modified residue (397)
  - modified residue (411)
  - modified residue (421)
  - modified residue (425)
Domains in SCOPe 2.08: d2i3oa1
Chain 'B':
Compound: Gamma-glutamyltransferase related protein
Species: Thermoplasma acidophilum [TaxId:2303]
Database cross-references and differences (RAF-indexed):
- Uniprot Q9HJH4 (Start-515)
  - modified residue (45)
  - modified residue (72)
  - modified residue (92)
  - modified residue (125)
  - modified residue (170)
  - modified residue (194)
  - modified residue (266)
  - modified residue (276)
  - modified residue (288)
  - modified residue (304)
  - modified residue (351)
  - modified residue (384)
  - modified residue (397)
  - modified residue (411)
  - modified residue (421)
  - modified residue (425)
Domains in SCOPe 2.08: d2i3ob_
Chain 'C':
Compound: Gamma-glutamyltransferase related protein
Species: Thermoplasma acidophilum [TaxId:2303]
Database cross-references and differences (RAF-indexed):
- Uniprot Q9HJH4 (Start-515)
  - modified residue (45)
  - modified residue (72)
  - modified residue (92)
  - modified residue (125)
  - modified residue (170)
  - modified residue (194)
  - modified residue (266)
  - modified residue (276)
  - modified residue (288)
  - modified residue (304)
  - modified residue (351)
  - modified residue (384)
  - modified residue (397)
  - modified residue (411)
  - modified residue (421)
  - modified residue (425)
Domains in SCOPe 2.08: d2i3oc_
Chain 'D':
Compound: Gamma-glutamyltransferase related protein
Species: Thermoplasma acidophilum [TaxId:2303]
Database cross-references and differences (RAF-indexed):
- Uniprot Q9HJH4 (0-515)
  - modified residue (0)
  - modified residue (45)
  - modified residue (72)
  - modified residue (92)
  - modified residue (125)
  - modified residue (170)
  - modified residue (194)
  - modified residue (266)
  - modified residue (276)
  - modified residue (288)
  - modified residue (304)
  - modified residue (351)
  - modified residue (384)
  - modified residue (397)
  - modified residue (411)
  - modified residue (421)
  - modified residue (425)
Domains in SCOPe 2.08: d2i3od_
Heterogens: HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>2i3oA (A:)
mfrsrpnalsqrsviassselaslagrdilkrggnifdaalavsamlcvtqnnlcglggd
lfalirdengqimdlngsgqasravsidyyesmgltkipergpyaaitvpgiagswdeif
rkfatmdiadilepairtasagfpitqnysdsiarsapvigqyrgwssifmpngsvpvag
eilkqpdlaesfrlmseegfrsfydgsladiiiaglegtgsplsdrdlrvyrpligkpvf
tdldefriyetspnsqgitviewirgmeshgydsrtmweakiedifetmeeaydkrrkit
dpsymniaqhdsangkkdglpkrdhndigdttyfsisdsegrsvsiiqsnymgfgsgivp
kgtgfvlqnrgsyftlqrdhpnalmpgkrtfhtlaacmvekehdlyaslgsmggdiqpqv
qmqilmeilkdntdpqaildkprwtepytiyeapgavyveseelyrnvskqisgrkvvlr
dvsqefgtaqittlirgdvvvgaadprgdgiaipys

Sequence, based on observed residues (ATOM records): (download)

>2i3oA (A:)
mfrsrpnalsqrsviassselaslagrdilkrggnifdaalavsamlcvtqnnlcglggd
lfalirdengqimdlngsgqasravsidyyesmgltkipergpyaaitvpgiagswdeif
rkfatmdiadilepairtasagfpitqnysdsiarsapvigqyrgwssifmpngsvpvag
eilkqpdlaesfrlmseegfrsfydgsladiiiaglegtgsplsdrdlrvyrpligkpvf
tdldefriyetspnsqgitviewirgmeshgydsrtmweakiedifetmeeaydkrrkit
dpsymnglpkrdhndigdttyfsisdsegrsvsiiqsnymgfgsgivpkgtgfvlqnrgs
yftlqrdhpnalmpgkrtfhtlaacmvekehdlyaslgsmggdiqpqvqmqilmeilkdn
tdpqaildkprwtepytiyeapgavyveseelyrnvskqisgrkvvlrdvsqefgtaqit
tlirgdvvvgaadprgdgiaipys

Chain 'B':
Sequence, based on SEQRES records: (download)

>2i3oB (B:)
mfrsrpnalsqrsviassselaslagrdilkrggnifdaalavsamlcvtqnnlcglggd
lfalirdengqimdlngsgqasravsidyyesmgltkipergpyaaitvpgiagswdeif
rkfatmdiadilepairtasagfpitqnysdsiarsapvigqyrgwssifmpngsvpvag
eilkqpdlaesfrlmseegfrsfydgsladiiiaglegtgsplsdrdlrvyrpligkpvf
tdldefriyetspnsqgitviewirgmeshgydsrtmweakiedifetmeeaydkrrkit
dpsymniaqhdsangkkdglpkrdhndigdttyfsisdsegrsvsiiqsnymgfgsgivp
kgtgfvlqnrgsyftlqrdhpnalmpgkrtfhtlaacmvekehdlyaslgsmggdiqpqv
qmqilmeilkdntdpqaildkprwtepytiyeapgavyveseelyrnvskqisgrkvvlr
dvsqefgtaqittlirgdvvvgaadprgdgiaipys

Sequence, based on observed residues (ATOM records): (download)

>2i3oB (B:)
frsrpnalsqrsviassselaslagrdilkrggnifdaalavsamlcvtqnnlcglggdl
falirdengqimdlngsgqasravsidyyesmgltkipergpyaaitvpgiagswdeifr
kfatmdiadilepairtasagfpitqnysdsiarsapvigqyrgwssifmpngsvpvage
ilkqpdlaesfrlmseegfrsfydgsladiiiaglegtgsplsdrdlrvyrpligkpvft
dldefriyetspnsqgitviewirgmeshgydsrtmweakiedifetmeeaydkrrkitd
psymnglpkrdhndigdttyfsisdsegrsvsiiqsnymgfgsgivpkgtgfvlqnrgsy
ftlqrdhpnalmpgkrtfhtlaacmvekehdlyaslgsmggdiqpqvqmqilmeilkdnt
dpqaildkprwtepytiyeapgavyveseelyrnvskqisgrkvvlrdvsqefgtaqitt
lirgdvvvgaadprgdgiaipys

Chain 'C':
Sequence, based on SEQRES records: (download)

>2i3oC (C:)
mfrsrpnalsqrsviassselaslagrdilkrggnifdaalavsamlcvtqnnlcglggd
lfalirdengqimdlngsgqasravsidyyesmgltkipergpyaaitvpgiagswdeif
rkfatmdiadilepairtasagfpitqnysdsiarsapvigqyrgwssifmpngsvpvag
eilkqpdlaesfrlmseegfrsfydgsladiiiaglegtgsplsdrdlrvyrpligkpvf
tdldefriyetspnsqgitviewirgmeshgydsrtmweakiedifetmeeaydkrrkit
dpsymniaqhdsangkkdglpkrdhndigdttyfsisdsegrsvsiiqsnymgfgsgivp
kgtgfvlqnrgsyftlqrdhpnalmpgkrtfhtlaacmvekehdlyaslgsmggdiqpqv
qmqilmeilkdntdpqaildkprwtepytiyeapgavyveseelyrnvskqisgrkvvlr
dvsqefgtaqittlirgdvvvgaadprgdgiaipys

Sequence, based on observed residues (ATOM records): (download)

>2i3oC (C:)
frsrpnalsqrsviassselaslagrdilkrggnifdaalavsamlcvtqnnlcglggdl
falirdengqimdlngsgqasravsidyyesmgltkipergpyaaitvpgiagswdeifr
kfatmdiadilepairtasagfpitqnysdsiarsapvigqyrgwssifmpngsvpvage
ilkqpdlaesfrlmseegfrsfydgsladiiiaglegtgsplsdrdlrvyrpligkpvft
dldefriyetspnsqgitviewirgmeshgydsrtmweakiedifetmeeaydkrrkitd
psymnglpkrdhndigdttyfsisdsegrsvsiiqsnymgfgsgivpkgtgfvlqnrgsy
ftlqrdhpnalmpgkrtfhtlaacmvekehdlyaslgsmggdiqpqvqmqilmeilkdnt
dpqaildkprwtepytiyeapgavyveseelyrnvskqisgrkvvlrdvsqefgtaqitt
lirgdvvvgaadprgdgiaipys

Chain 'D':
Sequence, based on SEQRES records: (download)

>2i3oD (D:)
mfrsrpnalsqrsviassselaslagrdilkrggnifdaalavsamlcvtqnnlcglggd
lfalirdengqimdlngsgqasravsidyyesmgltkipergpyaaitvpgiagswdeif
rkfatmdiadilepairtasagfpitqnysdsiarsapvigqyrgwssifmpngsvpvag
eilkqpdlaesfrlmseegfrsfydgsladiiiaglegtgsplsdrdlrvyrpligkpvf
tdldefriyetspnsqgitviewirgmeshgydsrtmweakiedifetmeeaydkrrkit
dpsymniaqhdsangkkdglpkrdhndigdttyfsisdsegrsvsiiqsnymgfgsgivp
kgtgfvlqnrgsyftlqrdhpnalmpgkrtfhtlaacmvekehdlyaslgsmggdiqpqv
qmqilmeilkdntdpqaildkprwtepytiyeapgavyveseelyrnvskqisgrkvvlr
dvsqefgtaqittlirgdvvvgaadprgdgiaipys

Sequence, based on observed residues (ATOM records): (download)

>2i3oD (D:)
mfrsrpnalsqrsviassselaslagrdilkrggnifdaalavsamlcvtqnnlcglggd
lfalirdengqimdlngsgqasravsidyyesmgltkipergpyaaitvpgiagswdeif
rkfatmdiadilepairtasagfpitqnysdsiarsapvigqyrgwssifmpngsvpvag
eilkqpdlaesfrlmseegfrsfydgsladiiiaglegtgsplsdrdlrvyrpligkpvf
tdldefriyetspnsqgitviewirgmeshgydsrtmweakiedifetmeeaydkrrkit
dpsymniaqhdsangkglpkrdhndigdttyfsisdsegrsvsiiqsnymgfgsgivpkg
tgfvlqnrgsyftlqrdhpnalmpgkrtfhtlaacmvekehdlyaslgsmggdiqpqvqm
qilmeilkdntdpqaildkprwtepytiyeapgavyveseelyrnvskqisgrkvvlrdv
sqefgtaqittlirgdvvvgaadprgdgiaipys