PDB entry 2hvy

View 2hvy on RCSB PDB site
Description: Crystal structure of an H/ACA box RNP from Pyrococcus furiosus
Class: isomerase/biosynthetic protein/RNA
Keywords: H/ACA RNA, RNP, PSEUDOURIDINE synthase, Guide RNA
Deposited on 2006-07-31, released 2006-09-12
The last revision prior to the SCOP 1.73 freeze date was dated 2006-09-26, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.24
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Probable tRNA pseudouridine synthase B
    Species: Pyrococcus furiosus
    Gene: truB
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d2hvya1, d2hvya2
  • Chain 'B':
    Compound: Small nucleolar rnp similar to gar1
    Species: Pyrococcus furiosus
    Gene: GAR1
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Ribosome biogenesis protein Nop10
    Species: Pyrococcus furiosus
    Gene: NOP10
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: 50S ribosomal protein L7Ae
    Species: Pyrococcus furiosus
    Gene: rpl7ae
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: h/aca RNA
    Species: synthetic, synthetic
  • Heterogens: ZN, ATP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2hvyA (A:)
mardevrrilpadikrevlikdenaetnpdwgfppekrpiemhiqfgvinldkppgptsh
evvawikkilnlekaghggtldpkvsgvlpvalekatrvvqallpagkeyvalmhlhgdv
pedkiiqvmkefegeiiqrpplrsavkrrlrtrkvyyievleiegrdvlfrvgveagtyi
rslihhiglalgvgahmselrrtrsgpfkedetlitlhdlvdyyyfwkedgieeyfrkai
qpmekavehlpkvwikdsavaavthgadlavpgiaklhagikrgdlvaimtlkdelvalg
kammtsqemlektkgiavdvekvfmprdwypklwekrdrshhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2hvyA (A:)
rilpadikrevlikdenaetnpdwgfppekrpiemhiqfgvinldkppgptshevvawik
kilnlekaghggtldpkvsgvlpvalekatrvvqallpagkeyvalmhlhgdvpedkiiq
vmkefegeiiqrppllrtrkvyyievleiegrdvlfrvgveagtyirslihhiglalgvg
ahmselrrtrsgpfkedetlitlhdlvdyyyfwkedgieeyfrkaiqpmekavehlpkvw
ikdsavaavthgadlavpgiaklhagikrgdlvaimtlkdelvalgkammtsqemlektk
giavdvekvfmprdwypklw

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.

  • Chain 'E':
    No sequence available.