SCOPe 2.08: Structural Classification of Proteins

PDB entry 2hqt

View 2hqt on RCSB PDB site
Description: Crystal structures of the interacting domains from yeast glutamyl-tRNA synthetase and tRNA aminoacylation and nuclear export cofactor Arc1p reveal a novel function for an old fold
Class: biosynthetic protein, RNA binding
Keywords: GST-fold, BIOSYNTHETIC PROTEIN, RNA BINDING
Deposited on 2006-07-19, released 2006-09-05
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-10-18, with a file datestamp of 2017-10-13.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: N/A
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: GU4 nucleic-binding protein 1
Species: Saccharomyces cerevisiae [TaxId:4932]
Gene: ARC1
Database cross-references and differences (RAF-indexed):
- Uniprot P46672
Domains in SCOPe 2.08: d2hqta1
Chain 'B':
Compound: GU4 nucleic-binding protein 1
Species: Saccharomyces cerevisiae [TaxId:4932]
Gene: ARC1
Database cross-references and differences (RAF-indexed):
- Uniprot P46672 (2-End)
Domains in SCOPe 2.08: d2hqtb_
Chain 'C':
Compound: GU4 nucleic-binding protein 1
Species: Saccharomyces cerevisiae [TaxId:4932]
Gene: ARC1
Database cross-references and differences (RAF-indexed):
- Uniprot P46672
Domains in SCOPe 2.08: d2hqtc_
Chain 'D':
Compound: GU4 nucleic-binding protein 1
Species: Saccharomyces cerevisiae [TaxId:4932]
Gene: ARC1
Database cross-references and differences (RAF-indexed):
- Uniprot P46672 (2-End)
Domains in SCOPe 2.08: d2hqtd_
Chain 'E':
Compound: GU4 nucleic-binding protein 1
Species: Saccharomyces cerevisiae [TaxId:4932]
Gene: ARC1
Database cross-references and differences (RAF-indexed):
- Uniprot P46672
Domains in SCOPe 2.08: d2hqte_
Chain 'F':
Compound: GU4 nucleic-binding protein 1
Species: Saccharomyces cerevisiae [TaxId:4932]
Gene: ARC1
Database cross-references and differences (RAF-indexed):
- Uniprot P46672 (2-End)
  - cloning artifact (1)
Domains in SCOPe 2.08: d2hqtf2, d2hqtf3
Chain 'G':
Compound: GU4 nucleic-binding protein 1
Species: Saccharomyces cerevisiae [TaxId:4932]
Gene: ARC1
Database cross-references and differences (RAF-indexed):
- Uniprot P46672 (2-End)
Domains in SCOPe 2.08: d2hqtg_
Chain 'H':
Compound: GU4 nucleic-binding protein 1
Species: Saccharomyces cerevisiae [TaxId:4932]
Gene: ARC1
Database cross-references and differences (RAF-indexed):
- Uniprot P46672
Domains in SCOPe 2.08: d2hqth_
Chain 'I':
Compound: GU4 nucleic-binding protein 1
Species: Saccharomyces cerevisiae [TaxId:4932]
Gene: ARC1
Database cross-references and differences (RAF-indexed):
- Uniprot P46672 (2-End)
Domains in SCOPe 2.08: d2hqti_
Chain 'J':
Compound: GU4 nucleic-binding protein 1
Species: Saccharomyces cerevisiae [TaxId:4932]
Gene: ARC1
Database cross-references and differences (RAF-indexed):
- Uniprot P46672 (2-End)
  - cloning artifact (1)
Domains in SCOPe 2.08: d2hqtj2, d2hqtj3
Chain 'K':
Compound: GU4 nucleic-binding protein 1
Species: Saccharomyces cerevisiae [TaxId:4932]
Gene: ARC1
Database cross-references and differences (RAF-indexed):
- Uniprot P46672
Domains in SCOPe 2.08: d2hqtk_
Chain 'L':
Compound: GU4 nucleic-binding protein 1
Species: Saccharomyces cerevisiae [TaxId:4932]
Gene: ARC1
Database cross-references and differences (RAF-indexed):
- Uniprot P46672
Domains in SCOPe 2.08: d2hqtl_
Chain 'M':
Compound: GU4 nucleic-binding protein 1
Species: Saccharomyces cerevisiae [TaxId:4932]
Gene: ARC1
Database cross-references and differences (RAF-indexed):
- Uniprot P46672 (2-End)
Domains in SCOPe 2.08: d2hqtm_
Chain 'N':
Compound: GU4 nucleic-binding protein 1
Species: Saccharomyces cerevisiae [TaxId:4932]
Gene: ARC1
Database cross-references and differences (RAF-indexed):
- Uniprot P46672 (2-End)
Domains in SCOPe 2.08: d2hqtn_
Chain 'O':
Compound: GU4 nucleic-binding protein 1
Species: Saccharomyces cerevisiae [TaxId:4932]
Gene: ARC1
Database cross-references and differences (RAF-indexed):
- Uniprot P46672
Domains in SCOPe 2.08: d2hqto_
Chain 'P':
Compound: GU4 nucleic-binding protein 1
Species: Saccharomyces cerevisiae [TaxId:4932]
Gene: ARC1
Database cross-references and differences (RAF-indexed):
- Uniprot P46672 (2-End)
Domains in SCOPe 2.08: d2hqtp_
Chain 'Q':
Compound: GU4 nucleic-binding protein 1
Species: Saccharomyces cerevisiae [TaxId:4932]
Gene: ARC1
Database cross-references and differences (RAF-indexed):
- Uniprot P46672 (2-End)
Domains in SCOPe 2.08: d2hqtq_
Chain 'R':
Compound: GU4 nucleic-binding protein 1
Species: Saccharomyces cerevisiae [TaxId:4932]
Gene: ARC1
Database cross-references and differences (RAF-indexed):
- Uniprot P46672
Domains in SCOPe 2.08: d2hqtr_
Chain 'S':
Compound: GU4 nucleic-binding protein 1
Species: Saccharomyces cerevisiae [TaxId:4932]
Gene: ARC1
Database cross-references and differences (RAF-indexed):
- Uniprot P46672
Domains in SCOPe 2.08: d2hqts_
Chain 'T':
Compound: GU4 nucleic-binding protein 1
Species: Saccharomyces cerevisiae [TaxId:4932]
Gene: ARC1
Database cross-references and differences (RAF-indexed):
- Uniprot P46672 (2-End)
Domains in SCOPe 2.08: d2hqtt_
Heterogens: SO4, HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>2hqtA (A:)
ghmsdlvtkfesliiskypvsftkeqsaqaaqwesvlksgqiqphldqlnlvlrdntfiv
stlyptstdvhvfevalplikdlvasskdvkstyttyrhilrwidymqnllevsstdkle
inhd