PDB entry 2hml

View 2hml on RCSB PDB site
Description: Crystal Structure of the Naphthalene 1,2-Dioxygenase F352V Mutant Bound to Phenanthrene.
Class: Oxidoreductase
Keywords: Oxidoreductase, Protien, Rieske Oxygenase
Deposited on 2006-07-11, released 2006-10-10
The last revision prior to the SCOPe 2.06 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.165
AEROSPACI score: 0.54 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Naphthalene 1,2-dioxygenase alpha subunit
    Species: Pseudomonas sp. [TaxId:306]
    Gene: doxB
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0A111 (0-End)
      • engineered (351)
    Domains in SCOPe 2.06: d2hmla1, d2hmla2
  • Chain 'B':
    Compound: Naphthalene 1,2-dioxygenase beta subunit
    Species: Pseudomonas sp. [TaxId:306]
    Gene: doxD
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2hmlb_
  • Heterogens: FE, SO4, FES, PEY, EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2hmlA (A:)
mnynnkilvsesglsqkhlihgdeelfqhelktifarnwlflthdslipapgdyvtakmg
idevivsrqndgsiraflnvcrhrgktlvsveagnakgfvcsyhgwgfgsngelqsvpfe
kdlygeslnkkclglkevarvesfhgfiygcfdqeapplmdylgdaawylepmfkhsggl
elvgppgkvvikanwkapaenfvgdayhvgwthasslrsgesifsslagnaalppegagl
qmtskygsgmgvlwdgysgvhsadlvpelmafggakqerlnkeigdvrariyrshlnctv
fpnnsmltcsgvfkvwnpidanttevwtyaivekdmpedlkrrladsvqrtvgpagfwes
ddndnmetasqngkkyqsrdsdllsnlgfgedvygdavypgvvgksaigetsyrgfyray
qahvsssnwaefehasstwhteltkttdr

    Sequence, based on observed residues (ATOM records): (download) 
    >2hmlA (A:)
mnynnkilvsesglsqkhlihgdeelfqhelktifarnwlflthdslipapgdyvtakmg
idevivsrqndgsiraflnvcrhrgktlvsveagnakgfvcsyhgwgfgsngelqsvpfe
kdlygeslnkkclglkevarvesfhgfiygcfdqeapplmdylgdaawylepmfkhsggl
elvgppgkvvikanwkapaenfvgdayhvgwthasslrsgesifsslagnaalppegagl
qmtskygsgmgvlwdgysgvhsadlvpelmafggakqerlnkeigdvrariyrshlnctv
fpnnsmltcsgvfkvwnpidanttevwtyaivekdmpedlkrrladsvqrtvgpagfwes
ddndnmetasqngkkyqsrdsdllsnlgfgedvygdavypgvvgksaigetsyrgfyray
qahvsssnwaefehasstwhteltkt

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2hmlB (B:)
mminiqedklvsahdaeeilrffnchdsalqqeattlltqeahlldiqayrawlehcvgs
evqyqvisrelraaserryklneamnvynenfqqlkvrvehqldpqnwgnspklrftrfi
tnvqaamdvndkellhirsnvilhrarrgnqvdvfyaaredkwkrgeggvrklvqrfvdy
perilqthnlmvfl

    Sequence, based on observed residues (ATOM records): (download) 
    >2hmlB (B:)
iniqedklvsahdaeeilrffnchdsalqqeattlltqeahlldiqayrawlehcvgsev
qyqvisrelraaserryklneamnvynenfqqlkvrvehqldpqnwgnspklrftrfitn
vqaamdvndkellhirsnvilhrarrgnqvdvfyaaredkwkrgeggvrklvqrfvdype
rilqthnlmvfl