PDB entry 2hmg

View 2hmg on RCSB PDB site
Description: refinement of the influenza virus hemagglutinin by simulated annealing
Class: Viral protein
Keywords: INFLUENZA VIRUS HEMAGGLUTININ, Viral protein
Deposited on 1989-09-11, released 1991-01-15
The last revision prior to the SCOPe 2.05 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 3 Å
R-factor: 0.222
AEROSPACI score: 0.22 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: hemagglutinin (ha1 chain)
    Species: Influenza A virus [TaxId:220997]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P03437 (0-327)
      • conflict (145)
    Domains in SCOPe 2.05: d2hmga_
  • Chain 'B':
    Compound: hemagglutinin (ha2 chain)
    Species: Influenza A virus [TaxId:220997]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d2hmgb_
  • Chain 'C':
    Compound: hemagglutinin (ha1 chain)
    Species: Influenza A virus [TaxId:220997]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P03437 (0-327)
      • conflict (145)
    Domains in SCOPe 2.05: d2hmgc_
  • Chain 'D':
    Compound: hemagglutinin (ha2 chain)
    Species: Influenza A virus [TaxId:220997]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d2hmgd_
  • Chain 'E':
    Compound: hemagglutinin (ha1 chain)
    Species: Influenza A virus [TaxId:220997]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P03437 (0-327)
      • conflict (145)
    Domains in SCOPe 2.05: d2hmge_
  • Chain 'F':
    Compound: hemagglutinin (ha2 chain)
    Species: Influenza A virus [TaxId:220997]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d2hmgf_
  • Heterogens: NAG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2hmgA (A:)
qdlpgndnstatlclghhavpngtlvktitddqievtnatelvqssstgkicnnphrild
gidctlidallgdphcdvfqnetwdlfverskafsncypydvpdyaslrslvassgtlef
itegftwtgvtqnggsnackrgpgsdffsrlnwltksgstypvlnvtmpnndnfdklyiw
gihhpstnqeqtslyvqasgrvtvstrrsqqtiipnigsrpwvrglssrisiywtivkpg
dvlvinsngnliaprgyfkmrtgkssimrsdapidtcisecitpngsipndkpfqnvnki
tygacpkyvkqntlklatgmrnvpekqt

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2hmgB (B:)
glfgaiagfiengwegmidgwygfrhqnsegtgqaadlkstqaaidqingklnrviektn
ekfhqiekefsevegriqdlekyvedtkidlwsynaellvalenqhtidltdsemnklfe
ktrrqlrenaeemgngcfkiyhkcdnaciesirngtydhdvyrdealnnrfqikg

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2hmgC (C:)
qdlpgndnstatlclghhavpngtlvktitddqievtnatelvqssstgkicnnphrild
gidctlidallgdphcdvfqnetwdlfverskafsncypydvpdyaslrslvassgtlef
itegftwtgvtqnggsnackrgpgsdffsrlnwltksgstypvlnvtmpnndnfdklyiw
gihhpstnqeqtslyvqasgrvtvstrrsqqtiipnigsrpwvrglssrisiywtivkpg
dvlvinsngnliaprgyfkmrtgkssimrsdapidtcisecitpngsipndkpfqnvnki
tygacpkyvkqntlklatgmrnvpekqt

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2hmgD (D:)
glfgaiagfiengwegmidgwygfrhqnsegtgqaadlkstqaaidqingklnrviektn
ekfhqiekefsevegriqdlekyvedtkidlwsynaellvalenqhtidltdsemnklfe
ktrrqlrenaeemgngcfkiyhkcdnaciesirngtydhdvyrdealnnrfqikg

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2hmgE (E:)
qdlpgndnstatlclghhavpngtlvktitddqievtnatelvqssstgkicnnphrild
gidctlidallgdphcdvfqnetwdlfverskafsncypydvpdyaslrslvassgtlef
itegftwtgvtqnggsnackrgpgsdffsrlnwltksgstypvlnvtmpnndnfdklyiw
gihhpstnqeqtslyvqasgrvtvstrrsqqtiipnigsrpwvrglssrisiywtivkpg
dvlvinsngnliaprgyfkmrtgkssimrsdapidtcisecitpngsipndkpfqnvnki
tygacpkyvkqntlklatgmrnvpekqt

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2hmgF (F:)
glfgaiagfiengwegmidgwygfrhqnsegtgqaadlkstqaaidqingklnrviektn
ekfhqiekefsevegriqdlekyvedtkidlwsynaellvalenqhtidltdsemnklfe
ktrrqlrenaeemgngcfkiyhkcdnaciesirngtydhdvyrdealnnrfqikg