PDB entry 2hbk
View 2hbk on RCSB PDB site
Description: Structure of the yeast nuclear exosome component, Rrp6p, reveals an interplay between the active site and the HRDC domain; Protein in complex with Mn
Class: hydrolase, gene regulation
Keywords: exosome, RNA metabolism, RNA surveillance, RNA processing, HYDROLASE, GENE REGULATION
Deposited on
2006-06-14, released
2006-07-25
The last revision prior to the SCOPe 2.08 freeze date was dated
2017-10-18, with a file datestamp of
2017-10-13.
Experiment type: XRAY
Resolution: 2.25 Å
R-factor: N/A
AEROSPACI score: 0.25
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Exosome complex exonuclease RRP6
Species: Saccharomyces cerevisiae [TaxId:4932]
Gene: RRP6
Database cross-references and differences (RAF-indexed):
- Uniprot Q12149 (2-End)
- cloning artifact (0-1)
- engineered (234)
Domains in SCOPe 2.08: d2hbka1, d2hbka2, d2hbka3 - Heterogens: MN, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2hbkA (A:)
gmvekpqlkfkspidnseshpfipllkekpnalkplseslrlvdddennpshyphpyeye
idhqeyspeilqireeipskswddsvpiwvdtstelesmledlkntkeiavdlehhdyrs
yygivclmqistrerdylvdtlklrenlhilnevftnpsivkvfhgafmdiiwlqrdlgl
yvvglfdtyhaskaiglprhslayllenfanfktskkyqladwrirplskpmtaaaradt
hfllniydqlrnkliesnklagvlyesrnvakrrfeyskyrpltpssevyspiekespwk
ilmyqynipperevlvrelyqwrdliarrddesprfvmpnqllaalvaytptdvigvvsl
tngvtehvrqnakllanlirdalrnikntneeatpipssetkadgillet
Sequence, based on observed residues (ATOM records): (download)
>2hbkA (A:)
gmvekpqlkfkspidnseshpfipllkekpnalkplseslrlvdddennpshyphpyeye
idhqeyspeilqireeipskswddsvpiwvdtstelesmledlkntkeiavdlehhdyrs
yygivclmqistrerdylvdtlklrenlhilnevftnpsivkvfhgafmdiiwlqrdlgl
yvvglfdtyhaskaiglprhslayllenfanfktskkyqladwrirplskpmtaaaradt
hfllniydqlrnkliesnklagvlyesrnvakrrfeyskyrpltpssevyspiekespwk
ilmyqynipperevlvrelyqwrdliarrddesprfvmpnqllaalvaytptdvigvvsl
tngvtehvrqnakllanlirdalrnikntn