PDB entry 2h1o
View 2h1o on RCSB PDB site
Description: Structure of FitAB bound to IR36 DNA fragment
Class: gene regulation/DNA complex
Keywords: PIN domain, RHH protein, DNA binding, tetramer of dimers, GENE REGULATION/DNA COMPLEX COMPLEX
Deposited on
2006-05-16, released
2006-09-26
The last revision prior to the SCOPe 2.07 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-03.
Experiment type: XRAY
Resolution: 3 Å
R-factor: 0.212
AEROSPACI score: 0.23
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: trafficking protein b
Species: NEISSERIA GONORRHOEAE [TaxId:485]
Gene: fitB
Database cross-references and differences (RAF-indexed):
- Uniprot Q9RF91 (0-137)
- engineered (42)
- engineered (62)
- engineered (115)
- expression tag (138-142)
Domains in SCOPe 2.07: d2h1oa1, d2h1oa2 - Chain 'B':
Compound: trafficking protein b
Species: NEISSERIA GONORRHOEAE [TaxId:485]
Gene: fitB
Database cross-references and differences (RAF-indexed):
- Uniprot Q9RF91 (0-137)
- engineered (42)
- engineered (62)
- engineered (115)
- expression tag (138-139)
Domains in SCOPe 2.07: d2h1ob1, d2h1ob2 - Chain 'C':
Compound: trafficking protein b
Species: NEISSERIA GONORRHOEAE [TaxId:485]
Gene: fitB
Database cross-references and differences (RAF-indexed):
- Uniprot Q9RF91 (0-137)
- engineered (42)
- engineered (62)
- engineered (115)
- expression tag (138-142)
Domains in SCOPe 2.07: d2h1oc1, d2h1oc2 - Chain 'D':
Compound: trafficking protein b
Species: NEISSERIA GONORRHOEAE [TaxId:485]
Gene: fitB
Database cross-references and differences (RAF-indexed):
- Uniprot Q9RF91 (0-137)
- engineered (42)
- engineered (62)
- engineered (115)
- expression tag (138-139)
Domains in SCOPe 2.07: d2h1od1, d2h1od2 - Chain 'E':
Compound: trafficking protein a
Species: NEISSERIA GONORRHOEAE [TaxId:485]
Gene: fitA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d2h1oe1 - Chain 'F':
Compound: trafficking protein a
Species: NEISSERIA GONORRHOEAE [TaxId:485]
Gene: fitA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d2h1of1 - Chain 'G':
Compound: trafficking protein a
Species: NEISSERIA GONORRHOEAE [TaxId:485]
Gene: fitA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d2h1og1 - Chain 'H':
Compound: trafficking protein a
Species: NEISSERIA GONORRHOEAE [TaxId:485]
Gene: fitA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d2h1oh1 - Chain 'U':
Compound: IR36-strand 1
Species: synthetic, synthetic
- Chain 'V':
Compound: IR36-strand 2
Species: synthetic, synthetic
- Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>2h1oA (A:)
milldtnviseplrpqpnervvawldsliledvylsaitvaemrlgvalllngkkknvlh
ermeqsilplfagrilpfdepvaaiyaqirsyakthgkeiaaadgyiaatakqhsmtvat
rdtgsffaadvavfnpwhlehhh
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2h1oB (B:)
milldtnviseplrpqpnervvawldsliledvylsaitvaemrlgvalllngkkknvlh
ermeqsilplfagrilpfdepvaaiyaqirsyakthgkeiaaadgyiaatakqhsmtvat
rdtgsffaadvavfnpwhlehhh
Sequence, based on observed residues (ATOM records): (download)
>2h1oB (B:)
milldtnviseplrpqpnervvawldsliledvylsaitvaemrlgvalllngkkknvlh
ermeqsilplfagrilpfdepvaaiyaqirsyakthgkeiaaadgyiaatakqhsmtvat
rdtgsffaadvavfnpwhle
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>2h1oC (C:)
milldtnviseplrpqpnervvawldsliledvylsaitvaemrlgvalllngkkknvlh
ermeqsilplfagrilpfdepvaaiyaqirsyakthgkeiaaadgyiaatakqhsmtvat
rdtgsffaadvavfnpwhlehhh
- Chain 'D':
Sequence, based on SEQRES records: (download)
>2h1oD (D:)
milldtnviseplrpqpnervvawldsliledvylsaitvaemrlgvalllngkkknvlh
ermeqsilplfagrilpfdepvaaiyaqirsyakthgkeiaaadgyiaatakqhsmtvat
rdtgsffaadvavfnpwhlehhh
Sequence, based on observed residues (ATOM records): (download)
>2h1oD (D:)
milldtnviseplrpqpnervvawldsliledvylsaitvaemrlgvalllngkkknvlh
ermeqsilplfagrilpfdepvaaiyaqirsyakthgkeiaaadgyiaatakqhsmtvat
rdtgsffaadvavfnpwhle
- Chain 'E':
Sequence; same for both SEQRES and ATOM records: (download)
>2h1oE (E:)
asvvirnlseathnaikfraraagrsteaeirlildniakaqqtvrlgsmlasigqeigg
veledvrg
- Chain 'F':
Sequence, based on SEQRES records: (download)
>2h1oF (F:)
asvvirnlseathnaikfraraagrsteaeirlildniakaqqtvrlgsmlasigqeigg
veledvrg
Sequence, based on observed residues (ATOM records): (download)
>2h1oF (F:)
asvvirnlseathnaikfraraagrsteaeirlildniakaqqtvrlgsmlasigqeigg
vele
- Chain 'G':
Sequence, based on SEQRES records: (download)
>2h1oG (G:)
asvvirnlseathnaikfraraagrsteaeirlildniakaqqtvrlgsmlasigqeigg
veledvrg
Sequence, based on observed residues (ATOM records): (download)
>2h1oG (G:)
asvvirnlseathnaikfraraagrsteaeirlildniakaqqtvrlgsmlasigqeigg
veledvr
- Chain 'H':
Sequence, based on SEQRES records: (download)
>2h1oH (H:)
asvvirnlseathnaikfraraagrsteaeirlildniakaqqtvrlgsmlasigqeigg
veledvrg
Sequence, based on observed residues (ATOM records): (download)
>2h1oH (H:)
asvvirnlseathnaikfraraagrsteaeirlildniakaqqtvrlgsmlasigqeigg
vel
- Chain 'U':
No sequence available.
- Chain 'V':
No sequence available.