PDB entry 2h1o

View 2h1o on RCSB PDB site
Description: Structure of FitAB bound to IR36 DNA fragment
Class: gene regulation/DNA complex
Keywords: PIN domain, RHH protein, DNA binding, tetramer of dimers
Deposited on 2006-05-16, released 2006-09-26
The last revision prior to the SCOP 1.73 freeze date was dated 2006-09-26, with a file datestamp of 2007-06-28.
Experiment type: XRAY
Resolution: 3 Å
R-factor: 0.212
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'A':
  Compound: trafficking protein b
  Species: NEISSERIA GONORRHOEAE
  Gene: fitB
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q9RF91 (0-137)
    • engineered (42)
    • engineered (62)
    • engineered (115)
    • cloning artifact (138-139)
    • his tag (140-142)
  Domains in SCOP 1.73: d2h1oa1
• Chain 'B':
  Compound: trafficking protein b
  Species: NEISSERIA GONORRHOEAE
  Gene: fitB
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q9RF91 (0-137)
    • engineered (42)
    • engineered (62)
    • engineered (115)
    • cloning artifact (138-139)
  Domains in SCOP 1.73: d2h1ob1
• Chain 'C':
  Compound: trafficking protein b
  Species: NEISSERIA GONORRHOEAE
  Gene: fitB
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q9RF91 (0-137)
    • engineered (42)
    • engineered (62)
    • engineered (115)
    • cloning artifact (138-139)
    • his tag (140-142)
  Domains in SCOP 1.73: d2h1oc1
• Chain 'D':
  Compound: trafficking protein b
  Species: NEISSERIA GONORRHOEAE
  Gene: fitB
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q9RF91 (0-137)
    • engineered (42)
    • engineered (62)
    • engineered (115)
    • cloning artifact (138-139)
  Domains in SCOP 1.73: d2h1od1
• Chain 'E':
  Compound: trafficking protein a
  Species: NEISSERIA GONORRHOEAE
  Gene: fitA
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q9RF92 (0-66)
• Chain 'F':
  Compound: trafficking protein a
  Species: NEISSERIA GONORRHOEAE
  Gene: fitA
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q9RF92 (0-End)
• Chain 'G':
  Compound: trafficking protein a
  Species: NEISSERIA GONORRHOEAE
  Gene: fitA
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q9RF92 (0-66)
• Chain 'H':
  Compound: trafficking protein a
  Species: NEISSERIA GONORRHOEAE
  Gene: fitA
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q9RF92 (0-End)
• Chain 'U':
  Compound: IR36-strand 1
  Species: synthetic, synthetic
  
• Chain 'V':
  Compound: IR36-strand 2
  Species: synthetic, synthetic
  
• Heterogens: HOH

PDB Chain Sequences:

• Chain 'A':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >2h1oA (A:)
  milldtnviseplrpqpnervvawldsliledvylsaitvaemrlgvalllngkkknvlh
  ermeqsilplfagrilpfdepvaaiyaqirsyakthgkeiaaadgyiaatakqhsmtvat
  rdtgsffaadvavfnpwhlehhh
  

  
  
• Chain 'B':
  Sequence, based on SEQRES records: (download)
  

  >2h1oB (B:)
  milldtnviseplrpqpnervvawldsliledvylsaitvaemrlgvalllngkkknvlh
  ermeqsilplfagrilpfdepvaaiyaqirsyakthgkeiaaadgyiaatakqhsmtvat
  rdtgsffaadvavfnpwhlehhh
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >2h1oB (B:)
  milldtnviseplrpqpnervvawldsliledvylsaitvaemrlgvalllngkkknvlh
  ermeqsilplfagrilpfdepvaaiyaqirsyakthgkeiaaadgyiaatakqhsmtvat
  rdtgsffaadvavfnpwhle
  

  
  
• Chain 'C':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >2h1oC (C:)
  milldtnviseplrpqpnervvawldsliledvylsaitvaemrlgvalllngkkknvlh
  ermeqsilplfagrilpfdepvaaiyaqirsyakthgkeiaaadgyiaatakqhsmtvat
  rdtgsffaadvavfnpwhlehhh
  

  
  
• Chain 'D':
  Sequence, based on SEQRES records: (download)
  

  >2h1oD (D:)
  milldtnviseplrpqpnervvawldsliledvylsaitvaemrlgvalllngkkknvlh
  ermeqsilplfagrilpfdepvaaiyaqirsyakthgkeiaaadgyiaatakqhsmtvat
  rdtgsffaadvavfnpwhlehhh
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >2h1oD (D:)
  milldtnviseplrpqpnervvawldsliledvylsaitvaemrlgvalllngkkknvlh
  ermeqsilplfagrilpfdepvaaiyaqirsyakthgkeiaaadgyiaatakqhsmtvat
  rdtgsffaadvavfnpwhle
  

  
  
• Chain 'E':
  No sequence available.
  
  
• Chain 'F':
  No sequence available.
  
  
• Chain 'G':
  No sequence available.
  
  
• Chain 'H':
  No sequence available.
  
  
• Chain 'U':
  No sequence available.
  
  
• Chain 'V':
  No sequence available.