PDB entry 2gx9

View 2gx9 on RCSB PDB site
Description: X-ray structure of influenza virus NS1 effector domain
Class: transcription, virus/viral protein
Keywords: NS1, Influenza, Effector Domain, alpha-helix beta-crescent, TRANSCRIPTION, VIRUS-VIRAL PROTEIN COMPLEX
Deposited on 2006-05-08, released 2006-05-30
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-09-09, with a file datestamp of 2020-09-04.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.36 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: NS1 Effector Domain
    Species: unidentified influenza virus [TaxId:11309]
    Gene: Segment 8 - NS1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q71QT3 (0-End)
      • modified residue (0)
      • modified residue (2)
      • modified residue (14)
      • modified residue (19)
      • modified residue (25)
      • modified residue (40)
      • modified residue (45)
    Domains in SCOPe 2.08: d2gx9a1
  • Chain 'B':
    Compound: NS1 Effector Domain
    Species: unidentified influenza virus [TaxId:11309]
    Gene: Segment 8 - NS1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q71QT3 (Start-128)
      • modified residue (14)
      • modified residue (19)
      • modified residue (25)
      • modified residue (40)
      • modified residue (45)
    Domains in SCOPe 2.08: d2gx9b_
  • Heterogens: SCN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2gx9A (A:)
mtmasvpasryltdmtleemsrdwsmlipkqkvagplcirmdqaimdkniilkanfsvif
drletlillrafteegaivgeisplpslpghtaedvknavgvligglewndntvrvsetl
qrfawrssn

    Sequence, based on observed residues (ATOM records): (download) 
    >2gx9A (A:)
mtmasvpasryltdmtleemsrdwsmlipkqkvagplcirmdqaimdkniilkanfsvif
drletlillrafteegaivgeisplpslpghtaedvknavgvligglewndntvrvsetl
qrfawrs

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2gx9B (B:)
mtmasvpasryltdmtleemsrdwsmlipkqkvagplcirmdqaimdkniilkanfsvif
drletlillrafteegaivgeisplpslpghtaedvknavgvligglewndntvrvsetl
qrfawrssn

    Sequence, based on observed residues (ATOM records): (download) 
    >2gx9B (B:)
asryltdmtleemsrdwsmlipkqkvagplcirmdqaimdkniilkanfsvifdrletli
llrafteegaivgeisplpslpghtaedvknavgvligglewndntvrvsetlqrfawrs
sn