PDB entry 2gsw

View 2gsw on RCSB PDB site
Description: Crystal Structure of the Putative NADPH-dependent Azobenzene FMN-Reductase YhdA from Bacillus subtilis, Northeast Structural Genomics Target SR135
Class: structural genomics, unknown function
Keywords: alpha-beta protein, Structural Genomics, PSI, Protein Structure Initiative, Northeast Structural Genomics Consortium, NESG, UNKNOWN FUNCTION
Deposited on 2006-04-26, released 2006-05-09
The last revision prior to the SCOPe 2.05 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.92 Å
R-factor: 0.26
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: yhdA
    Species: Bacillus subtilis subsp. subtilis [TaxId:224308]
    Gene: yhdA
    Database cross-references and differences (RAF-indexed):
    • GB CAB12762
      • modified residue (2)
      • modified residue (77)
      • modified residue (117)
      • modified residue (121)
      • modified residue (164)
    Domains in SCOPe 2.05: d2gswa_
  • Chain 'B':
    Compound: yhdA
    Species: Bacillus subtilis subsp. subtilis [TaxId:224308]
    Gene: yhdA
    Database cross-references and differences (RAF-indexed):
    • GB CAB12762
      • modified residue (2)
      • modified residue (77)
      • modified residue (117)
      • modified residue (121)
      • modified residue (164)
    Domains in SCOPe 2.05: d2gswb_
  • Chain 'C':
    Compound: yhdA
    Species: Bacillus subtilis subsp. subtilis [TaxId:224308]
    Gene: yhdA
    Database cross-references and differences (RAF-indexed):
    • GB CAB12762
      • modified residue (2)
      • modified residue (77)
      • modified residue (117)
      • modified residue (121)
      • modified residue (164)
    Domains in SCOPe 2.05: d2gswc_
  • Chain 'D':
    Compound: yhdA
    Species: Bacillus subtilis subsp. subtilis [TaxId:224308]
    Gene: yhdA
    Database cross-references and differences (RAF-indexed):
    • GB CAB12762
      • modified residue (2)
      • modified residue (77)
      • modified residue (117)
      • modified residue (121)
      • modified residue (164)
    Domains in SCOPe 2.05: d2gswd_
  • Heterogens: FMN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2gswA (A:)
mnmlvingtprkhgrtriaasyiaalyhtdlidlsefvlpvfngeaeqsellkvqelkqr
vtkadaivllspeyhsgmsgalknaldflsseqfkykpvallavagggkgginalnnmrt
vmrgvyanvipkqlvldpvhidvenatvaenikesikelveelsmfakagnpgvlehhhh
hh

    Sequence, based on observed residues (ATOM records): (download) 
    >2gswA (A:)
mlvingtprkhgrtriaasyiaalyhtdlidlsefvlpvfngeaeqsellkvqelkqrvt
kadaivllspeyhsgmsgalknaldflsseqfkykpvallavagggkgginalnnmrtvm
rgvyanvipkqlvldpvhidvenatvaenikesikelveelsmfakag

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2gswB (B:)
mnmlvingtprkhgrtriaasyiaalyhtdlidlsefvlpvfngeaeqsellkvqelkqr
vtkadaivllspeyhsgmsgalknaldflsseqfkykpvallavagggkgginalnnmrt
vmrgvyanvipkqlvldpvhidvenatvaenikesikelveelsmfakagnpgvlehhhh
hh

    Sequence, based on observed residues (ATOM records): (download) 
    >2gswB (B:)
mlvingtprkhgrtriaasyiaalyhtdlidlsefvlpvfngeaeqsellkvqelkqrvt
kadaivllspeyhsgmsgalknaldflsseqfkykpvallavagggkgginalnnmrtvm
rgvyanvipkqlvldpvhidvenatvaenikesikelveelsmfakag

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2gswC (C:)
mnmlvingtprkhgrtriaasyiaalyhtdlidlsefvlpvfngeaeqsellkvqelkqr
vtkadaivllspeyhsgmsgalknaldflsseqfkykpvallavagggkgginalnnmrt
vmrgvyanvipkqlvldpvhidvenatvaenikesikelveelsmfakagnpgvlehhhh
hh

    Sequence, based on observed residues (ATOM records): (download) 
    >2gswC (C:)
mlvingtprkhgrtriaasyiaalyhtdlidlsefvlpvfngeaeqsellkvqelkqrvt
kadaivllspeyhsgmsgalknaldflsseqfkykpvallavagggkgginalnnmrtvm
rgvyanvipkqlvldpvhidvenatvaenikesikelveelsmfakag

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2gswD (D:)
mnmlvingtprkhgrtriaasyiaalyhtdlidlsefvlpvfngeaeqsellkvqelkqr
vtkadaivllspeyhsgmsgalknaldflsseqfkykpvallavagggkgginalnnmrt
vmrgvyanvipkqlvldpvhidvenatvaenikesikelveelsmfakagnpgvlehhhh
hh

    Sequence, based on observed residues (ATOM records): (download) 
    >2gswD (D:)
mlvingtprkhgrtriaasyiaalyhtdlidlsefvlpvfngeaeqsellkvqelkqrvt
kadaivllspeyhsgmsgalknaldflsseqfkykpvallavagggkgginalnnmrtvm
rgvyanvipkqlvldpvhidvenatvaenikesikelveelsmfakag