PDB entry 2gon

View 2gon on RCSB PDB site
Description: Xray Structure of Gag133-278
Class: viral protein
Keywords: HIV-1 CA, Capsid, Beta Hairpin, Gag, Immature, Mature, VIRAL PROTEIN
Deposited on 2006-04-13, released 2006-09-26
The last revision prior to the SCOPe 2.03 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.205
AEROSPACI score: 0.45 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Capsid protein p24 (CA)
    Species: Human immunodeficiency virus 1 [TaxId:11676]
    Gene: GAG
    Database cross-references and differences (RAF-indexed):
    • Uniprot P12497 (Start-145)
      • modified residue (38)
      • modified residue (54)
      • modified residue (65)
      • modified residue (67)
      • modified residue (95)
      • modified residue (117)
      • modified residue (143)
    Domains in SCOPe 2.03: d2gona_
  • Chain 'B':
    Compound: Capsid protein p24 (CA)
    Species: Human immunodeficiency virus 1 [TaxId:11676]
    Gene: GAG
    Database cross-references and differences (RAF-indexed):
    • Uniprot P12497 (Start-145)
      • modified residue (9)
      • modified residue (38)
      • modified residue (54)
      • modified residue (65)
      • modified residue (67)
      • engineered (91)
      • modified residue (95)
      • modified residue (117)
      • modified residue (143)
    Domains in SCOPe 2.03: d2gonb_
  • Chain 'C':
    Compound: Capsid protein p24 (CA)
    Species: Human immunodeficiency virus 1 [TaxId:11676]
    Gene: GAG
    Database cross-references and differences (RAF-indexed):
    • Uniprot P12497 (0-145)
      • modified residue (9)
      • modified residue (38)
      • modified residue (54)
      • modified residue (65)
      • modified residue (67)
      • modified residue (95)
      • modified residue (117)
      • modified residue (143)
    Domains in SCOPe 2.03: d2gonc_
  • Chain 'D':
    Compound: Capsid protein p24 (CA)
    Species: Human immunodeficiency virus 1 [TaxId:11676]
    Gene: GAG
    Database cross-references and differences (RAF-indexed):
    • Uniprot P12497 (Start-145)
      • modified residue (38)
      • modified residue (54)
      • modified residue (65)
      • modified residue (67)
      • modified residue (95)
      • modified residue (117)
      • modified residue (143)
    Domains in SCOPe 2.03: d2gond_
  • Heterogens: FLC, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2gonA (A:)
pivqnlqgqmvhqaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvg
ghqaamqmlketineeaaewdrlhpvhagpiepgqmreprgsdiagttstlqeqigwmth
nppipvgeiykrwiilglnkivrmys

    Sequence, based on observed residues (ATOM records): (download) 
    >2gonA (A:)
hqaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvgghqaamqmlke
tineeaaewdrlhpvhmreprgsdiagttstlqeqigwmthnppipvgeiykrwiilgln
kivrmys

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2gonB (B:)
pivqnlqgqmvhqaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvg
ghqaamqmlketineeaaewdrlhpvhagpiepgqmreprgsdiagttstlqeqigwmth
nppipvgeiykrwiilglnkivrmys

    Sequence, based on observed residues (ATOM records): (download) 
    >2gonB (B:)
mvhqaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvgghqaamqml
ketineeaaewdrlhpvhagpiepgqmreprgsdiagttstlqeqigwmthnppipvgei
ykrwiilglnkivrmys

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2gonC (C:)
pivqnlqgqmvhqaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvg
ghqaamqmlketineeaaewdrlhpvhagpiepgqmreprgsdiagttstlqeqigwmth
nppipvgeiykrwiilglnkivrmys

    Sequence, based on observed residues (ATOM records): (download) 
    >2gonC (C:)
pivqnlqgqmvhqaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvg
ghqaamqmlketineeaaewdrlhpvhmreprgsdiagttstlqeqigwmthnppipvge
iykrwiilglnkivrmys

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2gonD (D:)
pivqnlqgqmvhqaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvg
ghqaamqmlketineeaaewdrlhpvhagpiepgqmreprgsdiagttstlqeqigwmth
nppipvgeiykrwiilglnkivrmys

    Sequence, based on observed residues (ATOM records): (download) 
    >2gonD (D:)
qaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvgghqaamqmlket
ineeaaewdrlhpvhpgqmreprgsdiagttstlqeqigwmthnppipvgeiykrwiilg
lnkivrmys