PDB entry 2gmy
View 2gmy on RCSB PDB site
Description: Crystal Structure of a Protein of Unknown Function ATU0492 from Agrobacterium tumefaciens, Putative Antioxidant Defence Protein AhpD
Class: structural genomics, unknown function
Keywords: Agrobacterium tumefaciens, Structural Genomics, PSI, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, UNKNOWN FUNCTION
Deposited on
2006-04-07, released
2006-05-09
The last revision prior to the SCOPe 2.08 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: 0.168
AEROSPACI score: 0.61
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Hypothetical protein Atu0492
Species: Agrobacterium tumefaciens [TaxId:176299]
Gene: GI:17934405
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2gmya1 - Chain 'B':
Compound: Hypothetical protein Atu0492
Species: Agrobacterium tumefaciens [TaxId:176299]
Gene: GI:17934405
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2gmyb_ - Chain 'C':
Compound: Hypothetical protein Atu0492
Species: Agrobacterium tumefaciens [TaxId:176299]
Gene: GI:17934405
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2gmyc_ - Chain 'D':
Compound: Hypothetical protein Atu0492
Species: Agrobacterium tumefaciens [TaxId:176299]
Gene: GI:17934405
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2gmyd_ - Chain 'E':
Compound: Hypothetical protein Atu0492
Species: Agrobacterium tumefaciens [TaxId:176299]
Gene: GI:17934405
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2gmye_ - Chain 'F':
Compound: Hypothetical protein Atu0492
Species: Agrobacterium tumefaciens [TaxId:176299]
Gene: GI:17934405
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2gmyf_ - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2gmyA (A:)
mktrinyakaspeafkavmalenyvqssglehrfihliklrasiingcafcvdmhvkesr
hdglseqwinlmsvwrespvyteqerallgwvdavtkiaetgapddafetlrahfsdeei
vkitvaigaintwnriavgfrsqhpveaaakaa
Sequence, based on observed residues (ATOM records): (download)
>2gmyA (A:)
ktrinyakaspeafkavmalenyvqssglehrfihliklrasiingcafcvdmhvkesrh
dglseqwinlmsvwrespvyteqerallgwvdavtkiaetgapddafetlrahfsdeeiv
kitvaigaintwnriavgfrsqhpvea
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2gmyB (B:)
mktrinyakaspeafkavmalenyvqssglehrfihliklrasiingcafcvdmhvkesr
hdglseqwinlmsvwrespvyteqerallgwvdavtkiaetgapddafetlrahfsdeei
vkitvaigaintwnriavgfrsqhpveaaakaa
Sequence, based on observed residues (ATOM records): (download)
>2gmyB (B:)
mktrinyakaspeafkavmalenyvqssglehrfihliklrasiingcafcvdmhvkesr
hdglseqwinlmsvwrespvyteqerallgwvdavtkiaetgapddafetlrahfsdeei
vkitvaigaintwnriavgfrsqhpv
- Chain 'C':
Sequence, based on SEQRES records: (download)
>2gmyC (C:)
mktrinyakaspeafkavmalenyvqssglehrfihliklrasiingcafcvdmhvkesr
hdglseqwinlmsvwrespvyteqerallgwvdavtkiaetgapddafetlrahfsdeei
vkitvaigaintwnriavgfrsqhpveaaakaa
Sequence, based on observed residues (ATOM records): (download)
>2gmyC (C:)
ktrinyakaspeafkavmalenyvqssglehrfihliklrasiingcafcvdmhvkesrh
dglseqwinlmsvwrespvyteqerallgwvdavtkiaetgapddafetlrahfsdeeiv
kitvaigaintwnriavgfrsqhpve
- Chain 'D':
Sequence, based on SEQRES records: (download)
>2gmyD (D:)
mktrinyakaspeafkavmalenyvqssglehrfihliklrasiingcafcvdmhvkesr
hdglseqwinlmsvwrespvyteqerallgwvdavtkiaetgapddafetlrahfsdeei
vkitvaigaintwnriavgfrsqhpveaaakaa
Sequence, based on observed residues (ATOM records): (download)
>2gmyD (D:)
ktrinyakaspeafkavmalenyvqssglehrfihliklrasiingcafcvdmhvkesrh
dglseqwinlmsvwrespvyteqerallgwvdavtkiaetgapddafetlrahfsdeeiv
kitvaigaintwnriavgfrsqhpv
- Chain 'E':
Sequence, based on SEQRES records: (download)
>2gmyE (E:)
mktrinyakaspeafkavmalenyvqssglehrfihliklrasiingcafcvdmhvkesr
hdglseqwinlmsvwrespvyteqerallgwvdavtkiaetgapddafetlrahfsdeei
vkitvaigaintwnriavgfrsqhpveaaakaa
Sequence, based on observed residues (ATOM records): (download)
>2gmyE (E:)
ktrinyakaspeafkavmalenyvqssglehrfihliklrasiingcafcvdmhvkesrh
dglseqwinlmsvwrespvyteqerallgwvdavtkiaetgapddafetlrahfsdeeiv
kitvaigaintwnriavgfrsqhpv
- Chain 'F':
Sequence, based on SEQRES records: (download)
>2gmyF (F:)
mktrinyakaspeafkavmalenyvqssglehrfihliklrasiingcafcvdmhvkesr
hdglseqwinlmsvwrespvyteqerallgwvdavtkiaetgapddafetlrahfsdeei
vkitvaigaintwnriavgfrsqhpveaaakaa
Sequence, based on observed residues (ATOM records): (download)
>2gmyF (F:)
ktrinyakaspeafkavmalenyvqssglehrfihliklrasiingcafcvdmhvkesrh
dglseqwinlmsvwrespvyteqerallgwvdavtkiaetgapddafetlrahfsdeeiv
kitvaigaintwnriavgfrsqhpvea