PDB entry 2gmp
View 2gmp on RCSB PDB site
Description: Metal-free (apo) P. angolensis seed lectin in complex with GlcNAC-beta(1-2)Man
Class: sugar binding protein
Keywords: legume lectin, metal-free lectin, sugar complex, GlcNAc-beta(1-2)Man, beta sandwich, SUGAR BINDING PROTEIN
Deposited on
2006-04-07, released
2006-07-25
The last revision prior to the SCOPe 2.06 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-25.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.198
AEROSPACI score: 0.34
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: lectin
Species: Pterocarpus angolensis [TaxId:182271]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d2gmpa_ - Chain 'B':
Compound: lectin
Species: Pterocarpus angolensis [TaxId:182271]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d2gmpb_ - Heterogens: NAG, MAN, SO4, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2gmpA (A:)
edslsfgfptfpsdqknlifqgdaqiknnavqltktdsngnpvastvgrilfsaqvhlwe
ksssrvanfqsqfsfslksplsngadgiaffiappdttipsgsgggllglfapgtaqnts
anqviavefdtfyaqdsntwdpnyphigidvnsirsvktvkwdrrdgqslnvlvtfnpst
rnldvvatysdgtryevsyevdvrsvlpewvrvgfsaasgeqyqthtleswsftstllyt
aqkkgenlalem
Sequence, based on observed residues (ATOM records): (download)
>2gmpA (A:)
edslsfgfptfpsdqknlifqgdaqiknnavqltktdsngnpvastvgrilfsaqvhlwe
ksssrvanfqsqfsfslksplsngadgiaffiappdttipsgsgggllglfapnqviave
fdtfysntwdpnyphigidvnsirsvktvkwdrrdgqslnvlvtfnpstrnldvvatysd
gtryevsyevdvrsvlpewvrvgfsaasgeqyqthtleswsftstlly
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2gmpB (B:)
edslsfgfptfpsdqknlifqgdaqiknnavqltktdsngnpvastvgrilfsaqvhlwe
ksssrvanfqsqfsfslksplsngadgiaffiappdttipsgsgggllglfapgtaqnts
anqviavefdtfyaqdsntwdpnyphigidvnsirsvktvkwdrrdgqslnvlvtfnpst
rnldvvatysdgtryevsyevdvrsvlpewvrvgfsaasgeqyqthtleswsftstllyt
aqkkgenlalem
Sequence, based on observed residues (ATOM records): (download)
>2gmpB (B:)
edslsfgfptfpsdqknlifqgdaqiknnavqltktdsngnpvastvgrilfsaqvhlwe
ksssrvanfqsqfsfslksplsngadgiaffiappdttipsgsgggllglfapgnqviav
efdtfyaqdsntwdpnyphigidvnsirsvktvkwdrrdgqslnvlvtfnpstrnldvva
tysdgtryevsyevdvrsvlpewvrvgfsaasgeqyqthtleswsftstllyt