PDB entry 2gme

View 2gme on RCSB PDB site
Description: Metal-free (apo) P. angolensis seed lectin
Class: sugar binding protein
Keywords: legume lectin, metal-free lectin, beta sandwich
Deposited on 2006-04-06, released 2006-07-25
The last revision prior to the SCOP 1.73 freeze date was dated 2006-07-25, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 1.75 Å
R-factor: 0.193
AEROSPACI score: 0.52 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: lectin
    Species: Pterocarpus angolensis
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8GSD2 (0-End)
      • modified residue (0)
    Domains in SCOP 1.73: d2gmea1
  • Chain 'B':
    Compound: lectin
    Species: Pterocarpus angolensis
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8GSD2 (0-End)
      • modified residue (0)
    Domains in SCOP 1.73: d2gmeb1
  • Heterogens: SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2gmeA (A:)
edslsfgfptfpsdqknlifqgdaqiknnavqltktdsngnpvastvgrilfsaqvhlwe
ksssrvanfqsqfsfslksplsngadgiaffiappdttipsgsgggllglfapgtaqnts
anqviavefdtfyaqdsntwdpnyphigidvnsirsvktvkwdrrdgqslnvlvtfnpst
rnldvvatysdgtryevsyevdvrsvlpewvrvgfsaasgeqyqthtleswsftstllyt
aqkkgenlalem

    Sequence, based on observed residues (ATOM records): (download) 
    >2gmeA (A:)
edslsfgfptfpsdqknlifqgdaqiknnavqltktdsngnpvastvgrilfsaqvhlwe
ksssrvanfqsqfsfslksplsngadgiaffiappdttipsgsgggllglfapnqviave
fdtfyntwdpnyphigidvnsirsvktvkwdrrdgqslnvlvtfnpstrnldvvatysdg
tryevsyevdvrsvlpewvrvgfsaasgeqyqthtleswsftstlly

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2gmeB (B:)
edslsfgfptfpsdqknlifqgdaqiknnavqltktdsngnpvastvgrilfsaqvhlwe
ksssrvanfqsqfsfslksplsngadgiaffiappdttipsgsgggllglfapgtaqnts
anqviavefdtfyaqdsntwdpnyphigidvnsirsvktvkwdrrdgqslnvlvtfnpst
rnldvvatysdgtryevsyevdvrsvlpewvrvgfsaasgeqyqthtleswsftstllyt
aqkkgenlalem

    Sequence, based on observed residues (ATOM records): (download) 
    >2gmeB (B:)
edslsfgfptfpsdqknlifqgdaqiknnavqltktdsngnpvastvgrilfsaqvhlwe
ksssrvanfqsqfsfslksplsngadgiaffiappdttipsgsgggllglfapnqviave
fdtfyaqdsntwdpnyphigidvnsirsvktvkwdrrdgqslnvlvtfnpstrnldvvat
ysdgtryevsyevdvrsvlpewvrvgfsaasgeqyqthtleswsftstllyt