PDB entry 2glp

View 2glp on RCSB PDB site
Description: Crystal structure of (3R)-Hydroxyacyl-Acyl Carrier Protein Dehydratase(FabZ) from Helicobacter pylori complexed with compound 1
Class: Lyase
Keywords: FabZ complex, Lyase
Deposited on 2006-04-05, released 2007-03-13
The last revision prior to the SCOPe 2.03 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.42 Å
R-factor: 0.189
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: (3R)-hydroxymyristoyl-acyl carrier protein dehydratase
    Species: Helicobacter pylori [TaxId:102617]
    Gene: FabZ
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d2glpa_
  • Chain 'B':
    Compound: (3R)-hydroxymyristoyl-acyl carrier protein dehydratase
    Species: Helicobacter pylori [TaxId:102617]
    Gene: FabZ
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d2glpb_
  • Chain 'C':
    Compound: (3R)-hydroxymyristoyl-acyl carrier protein dehydratase
    Species: Helicobacter pylori [TaxId:102617]
    Gene: FabZ
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d2glpc_
  • Chain 'D':
    Compound: (3R)-hydroxymyristoyl-acyl carrier protein dehydratase
    Species: Helicobacter pylori [TaxId:102617]
    Gene: FabZ
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d2glpd_
  • Chain 'E':
    Compound: (3R)-hydroxymyristoyl-acyl carrier protein dehydratase
    Species: Helicobacter pylori [TaxId:102617]
    Gene: FabZ
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d2glpe_
  • Chain 'F':
    Compound: (3R)-hydroxymyristoyl-acyl carrier protein dehydratase
    Species: Helicobacter pylori [TaxId:102617]
    Gene: FabZ
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d2glpf_
  • Heterogens: CL, BEN, BDE, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >2glpA (A:)
    mrgshhhhhhgsmeqshqnlqsqffiehilqilphrypmllvdritelqanqkivaykni
    tfnedvfnghfpnkpifpgvlivegmaqsggflaftslwgfdpeiaktkivyfmtidkvk
    fripvtpgdrleyhlevlkhkgmiwqvggtaqvdgkvvaeaelkamiaere
    

    Sequence, based on observed residues (ATOM records): (download)
    >2glpA (A:)
    lqsqffiehilqilphrypmllvdritelqanqkivayknitfnedvfnghfpnkpifpg
    vlivegmaqsggflaftslwgfdpeiaktkivyfmtidkvkfripvtpgdrleyhlevlk
    hkgmiwqvggtaqvdgkvvaeaelkamiaere
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >2glpB (B:)
    mrgshhhhhhgsmeqshqnlqsqffiehilqilphrypmllvdritelqanqkivaykni
    tfnedvfnghfpnkpifpgvlivegmaqsggflaftslwgfdpeiaktkivyfmtidkvk
    fripvtpgdrleyhlevlkhkgmiwqvggtaqvdgkvvaeaelkamiaere
    

    Sequence, based on observed residues (ATOM records): (download)
    >2glpB (B:)
    qsqffiehilqilphrypmllvdritelqanqkivayknitfnedvfnghfpnkpifpgv
    livegmaqsggflaftslwgfdpeiaktkivyfmtidkvkfripvtpgdrleyhlevlkh
    kgmiwqvggtaqvdgkvvaeaelkamiaere
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >2glpC (C:)
    mrgshhhhhhgsmeqshqnlqsqffiehilqilphrypmllvdritelqanqkivaykni
    tfnedvfnghfpnkpifpgvlivegmaqsggflaftslwgfdpeiaktkivyfmtidkvk
    fripvtpgdrleyhlevlkhkgmiwqvggtaqvdgkvvaeaelkamiaere
    

    Sequence, based on observed residues (ATOM records): (download)
    >2glpC (C:)
    qsqffiehilqilphrypmllvdritelqanqkivayknitfnedvfnghfpnkpifpgv
    livegmaqsggflaftslwgfdpeiaktkivyfmtidkvkfripvtpgdrleyhlevlkh
    kgmiwqvggtaqvdgkvvaeaelkamiaere
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >2glpD (D:)
    mrgshhhhhhgsmeqshqnlqsqffiehilqilphrypmllvdritelqanqkivaykni
    tfnedvfnghfpnkpifpgvlivegmaqsggflaftslwgfdpeiaktkivyfmtidkvk
    fripvtpgdrleyhlevlkhkgmiwqvggtaqvdgkvvaeaelkamiaere
    

    Sequence, based on observed residues (ATOM records): (download)
    >2glpD (D:)
    lqsqffiehilqilphrypmllvdritelqanqkivayknitfnedvfnghfpnkpifpg
    vlivegmaqsggflaftslwgfdpeiaktkivyfmtidkvkfripvtpgdrleyhlevlk
    hkgmiwqvggtaqvdgkvvaeaelkamiaere
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >2glpE (E:)
    mrgshhhhhhgsmeqshqnlqsqffiehilqilphrypmllvdritelqanqkivaykni
    tfnedvfnghfpnkpifpgvlivegmaqsggflaftslwgfdpeiaktkivyfmtidkvk
    fripvtpgdrleyhlevlkhkgmiwqvggtaqvdgkvvaeaelkamiaere
    

    Sequence, based on observed residues (ATOM records): (download)
    >2glpE (E:)
    lqsqffiehilqilphrypmllvdritelqanqkivayknitfnedvfnghfpnkpifpg
    vlivegmaqsggflaftslwgfdpeiaktkivyfmtidkvkfripvtpgdrleyhlevlk
    hkgmiwqvggtaqvdgkvvaeaelkamiaere
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >2glpF (F:)
    mrgshhhhhhgsmeqshqnlqsqffiehilqilphrypmllvdritelqanqkivaykni
    tfnedvfnghfpnkpifpgvlivegmaqsggflaftslwgfdpeiaktkivyfmtidkvk
    fripvtpgdrleyhlevlkhkgmiwqvggtaqvdgkvvaeaelkamiaere
    

    Sequence, based on observed residues (ATOM records): (download)
    >2glpF (F:)
    qffiehilqilphrypmllvdritelqanqkivayknitfnedvfnghfpnkpifpgvli
    vegmaqsggflaftslwgfdpeiaktkivyfmtidkvkfripvtpgdrleyhlevlkhkg
    miwqvggtaqvdgkvvaeaelkamiae