PDB entry 2gij
View 2gij on RCSB PDB site
Description: Q138F HincII bound to cognate DNA GTTAAC and Ca2+
Class: hydrolase/DNA
Keywords: protein DNA complex, indirect readout, DNA intercalation, endonuclease, HYDROLASE/DNA COMPLEX
Deposited on
2006-03-28, released
2006-07-18
The last revision prior to the SCOPe 2.03 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 1.93 Å
R-factor: 0.233
AEROSPACI score: 0.42
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Type II restriction enzyme HincII
Species: Haemophilus influenzae [TaxId:727]
Gene: hincIIR
Database cross-references and differences (RAF-indexed):
- Uniprot P17743 (0-256)
- conflict (128)
- engineered (136)
- conflict (171)
Domains in SCOPe 2.03: d2gija_ - Chain 'B':
Compound: Type II restriction enzyme HincII
Species: Haemophilus influenzae [TaxId:727]
Gene: hincIIR
Database cross-references and differences (RAF-indexed):
- Uniprot P17743 (0-End)
- conflict (128)
- engineered (136)
- conflict (171)
Domains in SCOPe 2.03: d2gijb_ - Chain 'E':
Compound: 5'-d(*gp*cp*cp*gp*gp*tp*tp*ap*ap*cp*cp*gp*gp*c)-3'
- Chain 'F':
Compound: 5'-d(*gp*cp*cp*gp*gp*tp*tp*ap*ap*cp*cp*gp*gp*c)-3'
- Heterogens: CA, NA, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2gijA (A:)
sfikpiyqdinsiligqkvkrpksgtlsghaagepfeklvykflkenlsdltfkqyeyln
dlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekqndtadillvkdq
fyelldvktrnisksafapniisayklaqtcakmidnkefdlfdinylevdwelngedlv
cvstsfaelfksepselyinwaaamqiqfhvrdldqgfngtreewaksylkhfvtqaeqr
aismidkfvkpfkkyil
Sequence, based on observed residues (ATOM records): (download)
>2gijA (A:)
sfikpiyqdinsiligqkvkrepfeklvykflkenlsdltfkqyeylndlfmknpaiigh
earyklfnsptllfllsrgkaatenwsienlfeekqndtadillvkdqfyelldvktrni
sksafapniisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfks
epselyinwaaamqiqfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpf
kkyil
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2gijB (B:)
sfikpiyqdinsiligqkvkrpksgtlsghaagepfeklvykflkenlsdltfkqyeyln
dlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekqndtadillvkdq
fyelldvktrnisksafapniisayklaqtcakmidnkefdlfdinylevdwelngedlv
cvstsfaelfksepselyinwaaamqiqfhvrdldqgfngtreewaksylkhfvtqaeqr
aismidkfvkpfkkyil
Sequence, based on observed residues (ATOM records): (download)
>2gijB (B:)
sfikpiyqdinsiligqfeklvykflkenlsdltfkqyeylndlfmknpaiighearykl
fnsptllfllsrgkaatenwsienlfeekqndtadillvkdqfyelldvktrnisksafa
pniisayklaqtcakmidnkefdlfdinylevdwegedlvcvstsfaelfksepselyin
waaamqiqfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkkyi
- Chain 'E':
No sequence available.
- Chain 'F':
No sequence available.