PDB entry 2gge

View 2gge on RCSB PDB site
Description: Crystal Structure of Mandelate Racemase/Muconate Lactonizing Enzyme from Bacillus Subtilis complexed with MG++ at 1.8 A
Class: structural genomics, unknown function
Keywords: MANDELATE RACEMASE/MUCONATE LACTONIZING ENZYME, TIM-BARREL, ENOLASE, OCTAMER, STRUCTURAL GENOMICS, PSI, NYSGXRC, Protein Structure Initiative, New York SGX Research Center for Structural Genomics, UNKNOWN FUNCTION
Deposited on 2006-03-23, released 2006-04-18
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-10-18, with a file datestamp of 2017-10-13.
Experiment type: XRAY
Resolution: 1.89 Å
R-factor: N/A
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: yitF
    Species: Bacillus subtilis [TaxId:1423]
    Gene: yitF
    Database cross-references and differences (RAF-indexed):
    • Uniprot O06741 (4-373)
      • cloning artifact (2-3)
      • cloning artifact (374)
    Domains in SCOPe 2.07: d2ggea1, d2ggea2, d2ggea3, d2ggea4
  • Chain 'B':
    Compound: yitF
    Species: Bacillus subtilis [TaxId:1423]
    Gene: yitF
    Database cross-references and differences (RAF-indexed):
    • Uniprot O06741 (4-373)
      • cloning artifact (1-3)
      • cloning artifact (374)
    Domains in SCOPe 2.07: d2ggeb1, d2ggeb2, d2ggeb3, d2ggeb4
  • Chain 'C':
    Compound: yitF
    Species: Bacillus subtilis [TaxId:1423]
    Gene: yitF
    Database cross-references and differences (RAF-indexed):
    • Uniprot O06741 (4-373)
      • cloning artifact (1-3)
      • cloning artifact (374)
    Domains in SCOPe 2.07: d2ggec1, d2ggec2, d2ggec3, d2ggec4
  • Chain 'D':
    Compound: yitF
    Species: Bacillus subtilis [TaxId:1423]
    Gene: yitF
    Database cross-references and differences (RAF-indexed):
    • Uniprot O06741 (4-373)
      • cloning artifact (1-3)
      • cloning artifact (374-375)
      • expression tag (376)
    Domains in SCOPe 2.07: d2gged1, d2gged2, d2gged3, d2gged4
  • Chain 'E':
    Compound: yitF
    Species: Bacillus subtilis [TaxId:1423]
    Gene: yitF
    Database cross-references and differences (RAF-indexed):
    • Uniprot O06741 (4-373)
      • cloning artifact (2-3)
      • cloning artifact (374)
    Domains in SCOPe 2.07: d2ggee1, d2ggee2, d2ggee3, d2ggee4
  • Chain 'F':
    Compound: yitF
    Species: Bacillus subtilis [TaxId:1423]
    Gene: yitF
    Database cross-references and differences (RAF-indexed):
    • Uniprot O06741 (4-373)
      • cloning artifact (2-3)
      • cloning artifact (374)
    Domains in SCOPe 2.07: d2ggef1, d2ggef2, d2ggef3, d2ggef4
  • Chain 'G':
    Compound: yitF
    Species: Bacillus subtilis [TaxId:1423]
    Gene: yitF
    Database cross-references and differences (RAF-indexed):
    • Uniprot O06741 (4-373)
      • cloning artifact (1-3)
      • cloning artifact (374)
    Domains in SCOPe 2.07: d2ggeg1, d2ggeg2, d2ggeg3, d2ggeg4
  • Chain 'H':
    Compound: yitF
    Species: Bacillus subtilis [TaxId:1423]
    Gene: yitF
    Database cross-references and differences (RAF-indexed):
    • Uniprot O06741 (4-373)
      • cloning artifact (1-3)
      • cloning artifact (374)
    Domains in SCOPe 2.07: d2ggeh1, d2ggeh2, d2ggeh3, d2ggeh4
  • Heterogens: MG, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2ggeA (A:)
malvkivrietfplfhrlekpygdangfkryrtcyliriitesgidgwgecvdwlpalhv
gftkriipfllgkqagsrlslvrtiqkwhqraasavsmalteiaakaadcsvcelwggry
reeipvyasfqsysdspqwisrsvsnveaqlkkgfeqikvkiggtsfkedvrhinalqht
agssitmildanqsydaaaafkweryfsewtnigwleeplpfdqpqdyamlrsrlsvpva
ggenmkgpaqyvpllsqrcldiiqpdvmhvngidefrdclqlaryfgvrasahaydgsls
rlyalfaqaclppwskmkndhiepiewdvmenpftdlvslqpskgmvhipkgkgigtein
meivnrykwdgsayeghhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2ggeA (A:)
lvkivrietfplfhrlekpygdangfkryrtcyliriitesgidgwgecvdwlpalhvgf
tkriipfllgkqagsrlslvrtiqkwhqraasavsmalteiaakaadcsvcelwggryre
eipvyasfqsysdspqwisrsvsnveaqlkkgfeqikvkiggtsfkedvrhinalqhtag
ssitmildanqsydaaaafkweryfsewtnigwleeplpfdqpqdyamlrsrlsvpvagg
enmkgpaqyvpllsqrcldiiqpdvmhvngidefrdclqlaryfgvrasahaydgslsrl
yalfaqaclppwskmkndhiepiewdvmenpftdlvslqpskgmvhipkgkgigteinme
ivnrykwdgsaye

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2ggeB (B:)
malvkivrietfplfhrlekpygdangfkryrtcyliriitesgidgwgecvdwlpalhv
gftkriipfllgkqagsrlslvrtiqkwhqraasavsmalteiaakaadcsvcelwggry
reeipvyasfqsysdspqwisrsvsnveaqlkkgfeqikvkiggtsfkedvrhinalqht
agssitmildanqsydaaaafkweryfsewtnigwleeplpfdqpqdyamlrsrlsvpva
ggenmkgpaqyvpllsqrcldiiqpdvmhvngidefrdclqlaryfgvrasahaydgsls
rlyalfaqaclppwskmkndhiepiewdvmenpftdlvslqpskgmvhipkgkgigtein
meivnrykwdgsayeghhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2ggeB (B:)
alvkivrietfplfhrlekpygdangfkryrtcyliriitesgidgwgecvdwlpalhvg
ftkriipfllgkqagsrlslvrtiqkwhqraasavsmalteiaakaadcsvcelwggryr
eeipvyasfqsysdspqwisrsvsnveaqlkkgfeqikvkiggtsfkedvrhinalqhta
gssitmildanqsydaaaafkweryfsewtnigwleeplpfdqpqdyamlrsrlsvpvag
genmkgpaqyvpllsqrcldiiqpdvmhvngidefrdclqlaryfgvrasahaydgslsr
lyalfaqaclppwskmkndhiepiewdvmenpftdlvslqpskgmvhipkgkgigteinm
eivnrykwdgsaye

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2ggeC (C:)
malvkivrietfplfhrlekpygdangfkryrtcyliriitesgidgwgecvdwlpalhv
gftkriipfllgkqagsrlslvrtiqkwhqraasavsmalteiaakaadcsvcelwggry
reeipvyasfqsysdspqwisrsvsnveaqlkkgfeqikvkiggtsfkedvrhinalqht
agssitmildanqsydaaaafkweryfsewtnigwleeplpfdqpqdyamlrsrlsvpva
ggenmkgpaqyvpllsqrcldiiqpdvmhvngidefrdclqlaryfgvrasahaydgsls
rlyalfaqaclppwskmkndhiepiewdvmenpftdlvslqpskgmvhipkgkgigtein
meivnrykwdgsayeghhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2ggeC (C:)
alvkivrietfplfhrlekpygdangfkryrtcyliriitesgidgwgecvdwlpalhvg
ftkriipfllgkqagsrlslvrtiqkwhqraasavsmalteiaakaadcsvcelwggryr
eeipvyasfqsysdspqwisrsvsnveaqlkkgfeqikvkiggtsfkedvrhinalqhta
gssitmildanqsydaaaafkweryfsewtnigwleeplpfdqpqdyamlrsrlsvpvag
genmkgpaqyvpllsqrcldiiqpdvmhvngidefrdclqlaryfgvrasahaydgslsr
lyalfaqaclppwskmkndhiepiewdvmenpftdlvslqpskgmvhipkgkgigteinm
eivnrykwdgsaye

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2ggeD (D:)
malvkivrietfplfhrlekpygdangfkryrtcyliriitesgidgwgecvdwlpalhv
gftkriipfllgkqagsrlslvrtiqkwhqraasavsmalteiaakaadcsvcelwggry
reeipvyasfqsysdspqwisrsvsnveaqlkkgfeqikvkiggtsfkedvrhinalqht
agssitmildanqsydaaaafkweryfsewtnigwleeplpfdqpqdyamlrsrlsvpva
ggenmkgpaqyvpllsqrcldiiqpdvmhvngidefrdclqlaryfgvrasahaydgsls
rlyalfaqaclppwskmkndhiepiewdvmenpftdlvslqpskgmvhipkgkgigtein
meivnrykwdgsayeghhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2ggeD (D:)
alvkivrietfplfhrlekpygdangfkryrtcyliriitesgidgwgecvdwlpalhvg
ftkriipfllgkqagsrlslvrtiqkwhqraasavsmalteiaakaadcsvcelwggryr
eeipvyasfqsysdspqwisrsvsnveaqlkkgfeqikvkiggtsfkedvrhinalqhta
gssitmildanqsydaaaafkweryfsewtnigwleeplpfdqpqdyamlrsrlsvpvag
genmkgpaqyvpllsqrcldiiqpdvmhvngidefrdclqlaryfgvrasahaydgslsr
lyalfaqaclppwskmkndhiepiewdvmenpftdlvslqpskgmvhipkgkgigteinm
eivnrykwdgsayegh

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >2ggeE (E:)
malvkivrietfplfhrlekpygdangfkryrtcyliriitesgidgwgecvdwlpalhv
gftkriipfllgkqagsrlslvrtiqkwhqraasavsmalteiaakaadcsvcelwggry
reeipvyasfqsysdspqwisrsvsnveaqlkkgfeqikvkiggtsfkedvrhinalqht
agssitmildanqsydaaaafkweryfsewtnigwleeplpfdqpqdyamlrsrlsvpva
ggenmkgpaqyvpllsqrcldiiqpdvmhvngidefrdclqlaryfgvrasahaydgsls
rlyalfaqaclppwskmkndhiepiewdvmenpftdlvslqpskgmvhipkgkgigtein
meivnrykwdgsayeghhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2ggeE (E:)
lvkivrietfplfhrlekpygdangfkryrtcyliriitesgidgwgecvdwlpalhvgf
tkriipfllgkqagsrlslvrtiqkwhqraasavsmalteiaakaadcsvcelwggryre
eipvyasfqsysdspqwisrsvsnveaqlkkgfeqikvkiggtsfkedvrhinalqhtag
ssitmildanqsydaaaafkweryfsewtnigwleeplpfdqpqdyamlrsrlsvpvagg
enmkgpaqyvpllsqrcldiiqpdvmhvngidefrdclqlaryfgvrasahaydgslsrl
yalfaqaclppwskmkndhiepiewdvmenpftdlvslqpskgmvhipkgkgigteinme
ivnrykwdgsaye

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >2ggeF (F:)
malvkivrietfplfhrlekpygdangfkryrtcyliriitesgidgwgecvdwlpalhv
gftkriipfllgkqagsrlslvrtiqkwhqraasavsmalteiaakaadcsvcelwggry
reeipvyasfqsysdspqwisrsvsnveaqlkkgfeqikvkiggtsfkedvrhinalqht
agssitmildanqsydaaaafkweryfsewtnigwleeplpfdqpqdyamlrsrlsvpva
ggenmkgpaqyvpllsqrcldiiqpdvmhvngidefrdclqlaryfgvrasahaydgsls
rlyalfaqaclppwskmkndhiepiewdvmenpftdlvslqpskgmvhipkgkgigtein
meivnrykwdgsayeghhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2ggeF (F:)
lvkivrietfplfhrlekpygdangfkryrtcyliriitesgidgwgecvdwlpalhvgf
tkriipfllgkqagsrlslvrtiqkwhqraasavsmalteiaakaadcsvcelwggryre
eipvyasfqsysdspqwisrsvsnveaqlkkgfeqikvkiggtsfkedvrhinalqhtag
ssitmildanqsydaaaafkweryfsewtnigwleeplpfdqpqdyamlrsrlsvpvagg
enmkgpaqyvpllsqrcldiiqpdvmhvngidefrdclqlaryfgvrasahaydgslsrl
yalfaqaclppwskmkndhiepiewdvmenpftdlvslqpskgmvhipkgkgigteinme
ivnrykwdgsaye

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >2ggeG (G:)
malvkivrietfplfhrlekpygdangfkryrtcyliriitesgidgwgecvdwlpalhv
gftkriipfllgkqagsrlslvrtiqkwhqraasavsmalteiaakaadcsvcelwggry
reeipvyasfqsysdspqwisrsvsnveaqlkkgfeqikvkiggtsfkedvrhinalqht
agssitmildanqsydaaaafkweryfsewtnigwleeplpfdqpqdyamlrsrlsvpva
ggenmkgpaqyvpllsqrcldiiqpdvmhvngidefrdclqlaryfgvrasahaydgsls
rlyalfaqaclppwskmkndhiepiewdvmenpftdlvslqpskgmvhipkgkgigtein
meivnrykwdgsayeghhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2ggeG (G:)
alvkivrietfplfhrlekpygdangfkryrtcyliriitesgidgwgecvdwlpalhvg
ftkriipfllgkqagsrlslvrtiqkwhqraasavsmalteiaakaadcsvcelwggryr
eeipvyasfqsysdspqwisrsvsnveaqlkkgfeqikvkiggtsfkedvrhinalqhta
gssitmildanqsydaaaafkweryfsewtnigwleeplpfdqpqdyamlrsrlsvpvag
genmkgpaqyvpllsqrcldiiqpdvmhvngidefrdclqlaryfgvrasahaydgslsr
lyalfaqaclppwskmkndhiepiewdvmenpftdlvslqpskgmvhipkgkgigteinm
eivnrykwdgsaye

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >2ggeH (H:)
malvkivrietfplfhrlekpygdangfkryrtcyliriitesgidgwgecvdwlpalhv
gftkriipfllgkqagsrlslvrtiqkwhqraasavsmalteiaakaadcsvcelwggry
reeipvyasfqsysdspqwisrsvsnveaqlkkgfeqikvkiggtsfkedvrhinalqht
agssitmildanqsydaaaafkweryfsewtnigwleeplpfdqpqdyamlrsrlsvpva
ggenmkgpaqyvpllsqrcldiiqpdvmhvngidefrdclqlaryfgvrasahaydgsls
rlyalfaqaclppwskmkndhiepiewdvmenpftdlvslqpskgmvhipkgkgigtein
meivnrykwdgsayeghhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2ggeH (H:)
alvkivrietfplfhrlekpygdangfkryrtcyliriitesgidgwgecvdwlpalhvg
ftkriipfllgkqagsrlslvrtiqkwhqraasavsmalteiaakaadcsvcelwggryr
eeipvyasfqsysdspqwisrsvsnveaqlkkgfeqikvkiggtsfkedvrhinalqhta
gssitmildanqsydaaaafkweryfsewtnigwleeplpfdqpqdyamlrsrlsvpvag
genmkgpaqyvpllsqrcldiiqpdvmhvngidefrdclqlaryfgvrasahaydgslsr
lyalfaqaclppwskmkndhiepiewdvmenpftdlvslqpskgmvhipkgkgigteinm
eivnrykwdgsaye