PDB entry 2gdv

View 2gdv on RCSB PDB site
Description: Sucrose phosphorylase from BIFIDOBACTERIUM ADOLESCENTIS reacted with sucrose
Class: transferase
Keywords: beta-alpha-barrels, dimer, glycoside hydrolase, transferase
Deposited on 2006-03-17, released 2006-09-26
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-08-04, with a file datestamp of 2009-07-31.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.198
AEROSPACI score: 0.44 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: sucrose phosphorylase
    Species: Bifidobacterium adolescentis [TaxId:1680]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2gdva1, d2gdva2
  • Chain 'B':
    Compound: sucrose phosphorylase
    Species: Bifidobacterium adolescentis [TaxId:1680]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d2gdvb1, d2gdvb2
  • Heterogens: BGC, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download)
    >2gdvA (A:)
    mknkvqlityadrlgdgtiksmtdilrtrfdgvydgvhilpfftpfdgadagfdpidhtk
    vderlgswddvaelskthnimvdaivnhmsweskqfqdvlakgeeseyypmfltmssvfp
    ngateedlagiyrprpglpfthykfagktrlvwvsftpqqvdidtdsdkgweylmsifdq
    maashvsyirldavgygakeagtscfmtpktfklisrlreegvkrgleilievhsyykkq
    veiaskvdrvydfalpplllhalstghvepvahwtdirpnnavtvldthdgigvidigsd
    qldrslkglvpdedvdnlvntihanthgesqaatgaaasnldlyqvnstyysalgcndqh
    yiaaravqfflpgvpqvyyvgalagkndmellrktnngrdinrhyystaeidenlkrpvv
    kalnalakfrneldafdgtfsyttdddtsisftwrgetsqatltfepkrglgvdnttpva
    mlewedsagdhrsddlianppvva
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >2gdvB (B:)
    mknkvqlityadrlgdgtiksmtdilrtrfdgvydgvhilpfftpfdgadagfdpidhtk
    vderlgswddvaelskthnimvdaivnhmsweskqfqdvlakgeeseyypmfltmssvfp
    ngateedlagiyrprpglpfthykfagktrlvwvsftpqqvdidtdsdkgweylmsifdq
    maashvsyirldavgygakeagtscfmtpktfklisrlreegvkrgleilievhsyykkq
    veiaskvdrvydfalpplllhalstghvepvahwtdirpnnavtvldthdgigvidigsd
    qldrslkglvpdedvdnlvntihanthgesqaatgaaasnldlyqvnstyysalgcndqh
    yiaaravqfflpgvpqvyyvgalagkndmellrktnngrdinrhyystaeidenlkrpvv
    kalnalakfrneldafdgtfsyttdddtsisftwrgetsqatltfepkrglgvdnttpva
    mlewedsagdhrsddlianppvva