PDB entry 2gc9

View 2gc9 on RCSB PDB site
Description: Crystal structure of p-coumaric acid decarboxylase (NP_786857.1) from Lactobacillus plantarum at 1.70 A resolution
Class: lyase
Keywords: NP_786857.1, P-COUMARIC ACID DECARBOXYLASE, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI, LYASE
Deposited on 2006-03-13, released 2006-03-21
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: 0.177
AEROSPACI score: 0.56 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: p-coumaric acid decarboxylase
    Species: Lactobacillus plantarum [TaxId:220668]
    Gene: pc05870a
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q88RY7 (1-178)
      • modified residue (1)
      • modified residue (44)
      • modified residue (59)
      • modified residue (82)
      • modified residue (116)
      • modified residue (140)
      • modified residue (159)
    Domains in SCOPe 2.08: d2gc9a1
  • Chain 'B':
    Compound: p-coumaric acid decarboxylase
    Species: Lactobacillus plantarum [TaxId:220668]
    Gene: pc05870a
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q88RY7 (1-End)
      • leader sequence (0)
      • modified residue (1)
      • modified residue (44)
      • modified residue (59)
      • modified residue (82)
      • modified residue (116)
      • modified residue (140)
      • modified residue (159)
    Domains in SCOPe 2.08: d2gc9b1, d2gc9b2
  • Heterogens: SO4, CIT, EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2gc9A (A:)
gmtktfktlddflgthfiytydngweyewyakndhtvdyrihggmvagrwvtdqkadivm
ltegiykiswteptgtdvaldfmpnekklhgtiffpkwveehpeitvtyqnehidlmeqs
rekyatypklvvpefanitymgdagqnnedviseapykempndirngkyfdqnyhrlnk

    Sequence, based on observed residues (ATOM records): (download) 
    >2gc9A (A:)
mtktfktlddflgthfiytydngweyewyakndhtvdyrihggmvagrwvtdqkadivml
tegiykiswteptgtdvaldfmpnekklhgtiffpkwveehpeitvtyqnehidlmeqsr
ekyatypklvvpefanitymgdagqnnedviseapykempndirngkyfdqnyhrlnk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2gc9B (B:)
gmtktfktlddflgthfiytydngweyewyakndhtvdyrihggmvagrwvtdqkadivm
ltegiykiswteptgtdvaldfmpnekklhgtiffpkwveehpeitvtyqnehidlmeqs
rekyatypklvvpefanitymgdagqnnedviseapykempndirngkyfdqnyhrlnk

    Sequence, based on observed residues (ATOM records): (download) 
    >2gc9B (B:)
gmtktfktlddflgthfiytydngweyewyakndhtvdyrihggmvagrwvtdqkadivm
ltegiykiswteptgtdvaldfmpnekklhgtiffpkwveehpeitvtyqnehidlmeqs
rekyatypklvvpefanitymgdagqnnedviseapykemp