PDB entry 2g6x
View 2g6x on RCSB PDB site
Description: Crystal structure of a novel green fluorescent protein from marine copepod Pontellina plumata
Class: luminescent protein
Keywords: green fluorescent protein, natural chromophore, rapid maturation, beta can, LUMINESCENT PROTEIN
Deposited on
2006-02-26, released
2006-03-28
The last revision prior to the SCOPe 2.07 freeze date was dated
2009-09-08, with a file datestamp of
2009-09-04.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.194
AEROSPACI score: 0.42
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: green fluorescent protein 2
Species: Pontellina plumata [TaxId:239963]
Gene: ppluGFP2
Database cross-references and differences (RAF-indexed):
- GB AAQ01184
- engineered (4)
- chromophore (57)
- engineered (116)
- engineered (148)
- engineered (150)
- engineered (154)
- engineered (167)
- engineered (199)
Domains in SCOPe 2.07: d2g6xa_ - Chain 'B':
Compound: green fluorescent protein 2
Species: Pontellina plumata [TaxId:239963]
Gene: ppluGFP2
Database cross-references and differences (RAF-indexed):
- GB AAQ01184 (1-End)
- cloning artifact (0)
- engineered (4)
- chromophore (57)
- engineered (116)
- engineered (148)
- engineered (150)
- engineered (154)
- engineered (167)
- engineered (199)
Domains in SCOPe 2.07: d2g6xb1, d2g6xb2 - Chain 'C':
Compound: green fluorescent protein 2
Species: Pontellina plumata [TaxId:239963]
Gene: ppluGFP2
Database cross-references and differences (RAF-indexed):
- GB AAQ01184 (1-218)
- engineered (4)
- chromophore (57)
- engineered (116)
- engineered (148)
- engineered (150)
- engineered (154)
- engineered (167)
- engineered (199)
- engineered (218)
Domains in SCOPe 2.07: d2g6xc_ - Chain 'D':
Compound: green fluorescent protein 2
Species: Pontellina plumata [TaxId:239963]
Gene: ppluGFP2
Database cross-references and differences (RAF-indexed):
- GB AAQ01184 (Start-218)
- engineered (4)
- chromophore (57)
- engineered (116)
- engineered (148)
- engineered (150)
- engineered (154)
- engineered (167)
- engineered (199)
- engineered (218)
Domains in SCOPe 2.07: d2g6xd_ - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2g6xA (A:)
lpameiecritgtlngvefelvgggegtpeqgrmtnkmkstkgaltfspyllshvmgygf
yhfgtypsgyenpflhainnggytntriekyedggvlhvsfsyryeagrvigdfkvmgtg
fpedsviftdkiirsnatvehlhpmgdndldgsftrtfslrdggyyssvvdshmhfksai
hpsilqnggpmfafrrveedhsntelgiveyqhafktpd
Sequence, based on observed residues (ATOM records): (download)
>2g6xA (A:)
ameiecritgtlngvefelvgggegtpeqgrmtnkmkstkgaltfspyllshvmgygfyh
fgtypsgyenpflhainnggytntriekyedggvlhvsfsyryeagrvigdfkvmgtgfp
edsviftdkiirsnatvehlhpmgdndldgsftrtfslrdggyyssvvdshmhfksaihp
silqnggpmfafrrveedhsntelgiveyqhafktp
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2g6xB (B:)
lpameiecritgtlngvefelvgggegtpeqgrmtnkmkstkgaltfspyllshvmgygf
yhfgtypsgyenpflhainnggytntriekyedggvlhvsfsyryeagrvigdfkvmgtg
fpedsviftdkiirsnatvehlhpmgdndldgsftrtfslrdggyyssvvdshmhfksai
hpsilqnggpmfafrrveedhsntelgiveyqhafktpd
Sequence, based on observed residues (ATOM records): (download)
>2g6xB (B:)
lpameiecritgtlngvefelvgggegtpeqgrmtnkmkstkgaltfspyllshvmgygf
yhfgtypsgyenpflhainnggytntriekyedggvlhvsfsyryeagrvigdfkvmgtg
fpedsviftdkiirsnatvehlhpmgdndldgsftrtfslrdggyyssvvdshmhfksai
hpsilqnggpmfafrrveedhsntelgiveyqhafktp
- Chain 'C':
Sequence, based on SEQRES records: (download)
>2g6xC (C:)
lpameiecritgtlngvefelvgggegtpeqgrmtnkmkstkgaltfspyllshvmgygf
yhfgtypsgyenpflhainnggytntriekyedggvlhvsfsyryeagrvigdfkvmgtg
fpedsviftdkiirsnatvehlhpmgdndldgsftrtfslrdggyyssvvdshmhfksai
hpsilqnggpmfafrrveedhsntelgiveyqhafktpd
Sequence, based on observed residues (ATOM records): (download)
>2g6xC (C:)
pameiecritgtlngvefelvgggegtpeqgrmtnkmkstkgaltfspyllshvmgygfy
hfgtypsgyenpflhainnggytntriekyedggvlhvsfsyryeagrvigdfkvmgtgf
pedsviftdkiirsnatvehlhpmgdndldgsftrtfslrdggyyssvvdshmhfksaih
psilqnggpmfafrrveedhsntelgiveyqhafktpd
- Chain 'D':
Sequence, based on SEQRES records: (download)
>2g6xD (D:)
lpameiecritgtlngvefelvgggegtpeqgrmtnkmkstkgaltfspyllshvmgygf
yhfgtypsgyenpflhainnggytntriekyedggvlhvsfsyryeagrvigdfkvmgtg
fpedsviftdkiirsnatvehlhpmgdndldgsftrtfslrdggyyssvvdshmhfksai
hpsilqnggpmfafrrveedhsntelgiveyqhafktpd
Sequence, based on observed residues (ATOM records): (download)
>2g6xD (D:)
ameiecritgtlngvefelvgggegtpeqgrmtnkmkstkgaltfspyllshvmgygfyh
fgtypsgyenpflhainnggytntriekyedggvlhvsfsyryeagrvigdfkvmgtgfp
edsviftdkiirsnatvehlhpmgdndldgsftrtfslrdggyyssvvdshmhfksaihp
silqnggpmfafrrveedhsntelgiveyqhafktpd