PDB entry 2fyk
View 2fyk on RCSB PDB site
Description: Crystal Structure Of Biotin Protein Ligase From Pyrococcus Horikoshii OT3 in complex with ADP and Biotin
Class: ligase
Keywords: Biotin Biosynthesis, Dimer, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, LIGASE
Deposited on
2006-02-08, released
2006-08-08
The last revision prior to the SCOPe 2.07 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: 0.199
AEROSPACI score: 0.57
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: biotin--protein ligase
Species: Pyrococcus horikoshii [TaxId:70601]
Gene: birA
Database cross-references and differences (RAF-indexed):
- Uniprot O57883 (0-234)
- modified residue (0)
- modified residue (43)
- modified residue (142)
- modified residue (175)
- modified residue (185)
Domains in SCOPe 2.07: d2fyka1, d2fyka2 - Chain 'B':
Compound: biotin--protein ligase
Species: Pyrococcus horikoshii [TaxId:70601]
Gene: birA
Database cross-references and differences (RAF-indexed):
- Uniprot O57883 (0-234)
- modified residue (0)
- modified residue (43)
- modified residue (142)
- modified residue (175)
- modified residue (185)
Domains in SCOPe 2.07: d2fykb1, d2fykb2 - Heterogens: ADP, BTN, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>2fykA (A:)
mlglktsiigrrviyfqeitstnefaktsyleegtvivadkqtmghgrlnrkwespeggl
wlsivlspkvpqkdlpkivflgavgvvetlkefsidgrikwpndvlvnykkiagvlvegk
gdkivlgiglnvnnkvpngatsmklelgsevpllsvfrslitnldrlylnflknpmdiln
lvrdnmilgvrvkilgdgsfegiaediddfgrliirldsgevkkviygdvslrfl
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>2fykB (B:)
mlglktsiigrrviyfqeitstnefaktsyleegtvivadkqtmghgrlnrkwespeggl
wlsivlspkvpqkdlpkivflgavgvvetlkefsidgrikwpndvlvnykkiagvlvegk
gdkivlgiglnvnnkvpngatsmklelgsevpllsvfrslitnldrlylnflknpmdiln
lvrdnmilgvrvkilgdgsfegiaediddfgrliirldsgevkkviygdvslrfl