PDB entry 2fw2

View 2fw2 on RCSB PDB site
Description: Catalytic domain of CDY
Class: gene regulation
Keywords: chromodomain, chromosome Y, Structural Genomics, Structural Genomics Consortium, SGC
Deposited on 2006-01-31, released 2006-02-14
The last revision prior to the SCOP 1.73 freeze date was dated 2006-02-14, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.188
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Testis-specific chromodomain protein Y 2
    Species: HOMO SAPIENS
    Gene: CDY2A, CDY2
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d2fw2a1
  • Chain 'B':
    Compound: Testis-specific chromodomain protein Y 2
    Species: HOMO SAPIENS
    Gene: CDY2A, CDY2
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d2fw2b1
  • Chain 'C':
    Compound: Testis-specific chromodomain protein Y 2
    Species: HOMO SAPIENS
    Gene: CDY2A, CDY2
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d2fw2c1
  • Chain 'D':
    Compound: Testis-specific chromodomain protein Y 2
    Species: HOMO SAPIENS
    Gene: CDY2A, CDY2
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d2fw2d1
  • Chain 'E':
    Compound: Testis-specific chromodomain protein Y 2
    Species: HOMO SAPIENS
    Gene: CDY2A, CDY2
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d2fw2e1
  • Chain 'F':
    Compound: Testis-specific chromodomain protein Y 2
    Species: HOMO SAPIENS
    Gene: CDY2A, CDY2
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d2fw2f1
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2fw2A (A:)
ityrdivvkkedgftqivlstrsteknalntevikemvnalnsaaaddsklvlfsaagsv
fccgldfgyfvrhlrndrntaslemvdtiknfvntfiqfkkpivvsvngpaiglgasilp
lcdlvwanekawfqtpyttfgqspdgcssitfpkmmgkasanemliagrkltareacakg
lvsqvfltgtftqevmiqikelasynaivleeckalvrcnikleleqanerecevlrkiw
ssaqgiesmlkyvenkidef

    Sequence, based on observed residues (ATOM records): (download) 
    >2fw2A (A:)
yrdivvkkedgftqivlstrsteknalntevikemvnalnsaaaddsklvlfsaagsvfc
cgldfgyfvrhlrndrntaslemvdtiknfvntfiqfkkpivvsvngpaiglgasilplc
dlvwanekawfqtpyttfgqspdgcssitfpkmmgkasanemliagrkltareacakglv
sqvfltgtftqevmiqikelasynaivleeckalvrcnikleleqanerecevlrkiwss
aqgiesmlkyvenkidef

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2fw2B (B:)
ityrdivvkkedgftqivlstrsteknalntevikemvnalnsaaaddsklvlfsaagsv
fccgldfgyfvrhlrndrntaslemvdtiknfvntfiqfkkpivvsvngpaiglgasilp
lcdlvwanekawfqtpyttfgqspdgcssitfpkmmgkasanemliagrkltareacakg
lvsqvfltgtftqevmiqikelasynaivleeckalvrcnikleleqanerecevlrkiw
ssaqgiesmlkyvenkidef

    Sequence, based on observed residues (ATOM records): (download) 
    >2fw2B (B:)
ityrdivvkkedgftqivlstrsteknalntevikemvnalnsaaaddsklvlfsaagsv
fccgldfgyfvrhlrndrntaslemvdtiknfvntfiqfkkpivvsvngpaiglgasilp
lcdlvwanekawfqtpyttfgqspdgcssitfpkmmgkasanemliagrkltareacakg
lvsqvfltgtftqevmiqikelasynaivleeckalvrcnikleleqanerecevlrkiw
ssaqgiesmlkyven

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2fw2C (C:)
ityrdivvkkedgftqivlstrsteknalntevikemvnalnsaaaddsklvlfsaagsv
fccgldfgyfvrhlrndrntaslemvdtiknfvntfiqfkkpivvsvngpaiglgasilp
lcdlvwanekawfqtpyttfgqspdgcssitfpkmmgkasanemliagrkltareacakg
lvsqvfltgtftqevmiqikelasynaivleeckalvrcnikleleqanerecevlrkiw
ssaqgiesmlkyvenkidef

    Sequence, based on observed residues (ATOM records): (download) 
    >2fw2C (C:)
ityrdivvkkedgftqivlstrsteknalntevikemvnalnsaaaddsklvlfsaagsv
fccgldfgyfvrhlrndrntaslemvdtiknfvntfiqfkkpivvsvngpaiglgasilp
lcdlvwanekawfqtpyttfgqspdgcssitfpkmmgkasanemliagrkltareacakg
lvsqvfltgtftqevmiqikelasynaivleeckalvrcnikleleqanerecevlrkiw
ssaqgiesmlkyvenk

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2fw2D (D:)
ityrdivvkkedgftqivlstrsteknalntevikemvnalnsaaaddsklvlfsaagsv
fccgldfgyfvrhlrndrntaslemvdtiknfvntfiqfkkpivvsvngpaiglgasilp
lcdlvwanekawfqtpyttfgqspdgcssitfpkmmgkasanemliagrkltareacakg
lvsqvfltgtftqevmiqikelasynaivleeckalvrcnikleleqanerecevlrkiw
ssaqgiesmlkyvenkidef

    Sequence, based on observed residues (ATOM records): (download) 
    >2fw2D (D:)
tyrdivvkkedgftqivlstrsteknalntevikemvnalnsaaaddsklvlfsaagsvf
ccgldfgyfvrhlrndrntaslemvdtiknfvntfiqfkkpivvsvngpaiglgasilpl
cdlvwanekawfqtpyttfgqspdgcssitfpkmmgkasanemliagrkltareacakgl
vsqvfltgtftqevmiqikelasynaivleeckalvrcnikleleqanerecevlrkiws
saqgiesmlkyvenkid

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >2fw2E (E:)
ityrdivvkkedgftqivlstrsteknalntevikemvnalnsaaaddsklvlfsaagsv
fccgldfgyfvrhlrndrntaslemvdtiknfvntfiqfkkpivvsvngpaiglgasilp
lcdlvwanekawfqtpyttfgqspdgcssitfpkmmgkasanemliagrkltareacakg
lvsqvfltgtftqevmiqikelasynaivleeckalvrcnikleleqanerecevlrkiw
ssaqgiesmlkyvenkidef

    Sequence, based on observed residues (ATOM records): (download) 
    >2fw2E (E:)
tyrdivvkkedgftqivlstrsteknalntevikemvnalnsaaaddsklvlfsaagsvf
ccgldfgyfvrhlrndrntaslemvdtiknfvntfiqfkkpivvsvngpaiglgasilpl
cdlvwanekawfqtpyttfgqspdgcssitfpkmmgkasanemliagrkltareacakgl
vsqvfltgtftqevmiqikelasynaivleeckalvrcnikleleqanerecevlrkiws
saqgiesmlkyvenkidef

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2fw2F (F:)
ityrdivvkkedgftqivlstrsteknalntevikemvnalnsaaaddsklvlfsaagsv
fccgldfgyfvrhlrndrntaslemvdtiknfvntfiqfkkpivvsvngpaiglgasilp
lcdlvwanekawfqtpyttfgqspdgcssitfpkmmgkasanemliagrkltareacakg
lvsqvfltgtftqevmiqikelasynaivleeckalvrcnikleleqanerecevlrkiw
ssaqgiesmlkyvenkidef