SCOPe 2.07: Structural Classification of Proteins

PDB entry 2frv

View 2frv on RCSB PDB site
Description: crystal structure of the oxidized form of ni-fe hydrogenase
Class: oxidoreductase
Keywords: oxidoreductase, ni-fe hydrogenase
Deposited on 1997-06-10, released 1998-06-17
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-03-24, with a file datestamp of 2009-03-20.
Experiment type: XRAY
Resolution: 2.54 Å
R-factor: 0.202
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: periplasmic hydrogenase
Species: Desulfovibrio gigas [TaxId:879]
Database cross-references and differences (RAF-indexed):
- Uniprot P12943 (Start-263)
  - conflict (23)
  - conflict (88)
Domains in SCOPe 2.07: d2frva_
Chain 'B':
Compound: periplasmic hydrogenase
Species: Desulfovibrio gigas [TaxId:879]
Database cross-references and differences (RAF-indexed):
- Uniprot P12944 (Start-535)
  - conflict (143)
  - conflict (331)
  - conflict (481)
  - conflict (496)
Domains in SCOPe 2.07: d2frvb_
Chain 'C':
Compound: periplasmic hydrogenase
Species: Desulfovibrio gigas [TaxId:879]
Database cross-references and differences (RAF-indexed):
- Uniprot P12943 (Start-263)
  - conflict (23)
  - conflict (88)
Domains in SCOPe 2.07: d2frvc_
Chain 'D':
Compound: periplasmic hydrogenase
Species: Desulfovibrio gigas [TaxId:879]
Database cross-references and differences (RAF-indexed):
- Uniprot P12944 (Start-535)
  - conflict (143)
  - conflict (331)
  - conflict (481)
  - conflict (496)
Domains in SCOPe 2.07: d2frvd_
Chain 'E':
Compound: periplasmic hydrogenase
Species: Desulfovibrio gigas [TaxId:879]
Database cross-references and differences (RAF-indexed):
- Uniprot P12943 (Start-263)
  - conflict (23)
  - conflict (88)
Domains in SCOPe 2.07: d2frve_
Chain 'F':
Compound: periplasmic hydrogenase
Species: Desulfovibrio gigas [TaxId:879]
Database cross-references and differences (RAF-indexed):
- Uniprot P12944 (Start-535)
  - conflict (143)
  - conflict (331)
  - conflict (481)
  - conflict (496)
Domains in SCOPe 2.07: d2frvf_
Chain 'G':
Compound: periplasmic hydrogenase
Species: Desulfovibrio gigas [TaxId:879]
Database cross-references and differences (RAF-indexed):
- Uniprot P12943 (Start-263)
  - conflict (23)
  - conflict (88)
Domains in SCOPe 2.07: d2frvg_
Chain 'H':
Compound: periplasmic hydrogenase
Species: Desulfovibrio gigas [TaxId:879]
Database cross-references and differences (RAF-indexed):
- Uniprot P12944 (Start-535)
  - conflict (143)
  - conflict (331)
  - conflict (481)
  - conflict (496)
Domains in SCOPe 2.07: d2frvh_
Chain 'I':
Compound: periplasmic hydrogenase
Species: Desulfovibrio gigas [TaxId:879]
Database cross-references and differences (RAF-indexed):
- Uniprot P12943 (Start-263)
  - conflict (23)
  - conflict (88)
Domains in SCOPe 2.07: d2frvi_
Chain 'J':
Compound: periplasmic hydrogenase
Species: Desulfovibrio gigas [TaxId:879]
Database cross-references and differences (RAF-indexed):
- Uniprot P12944 (Start-535)
  - conflict (143)
  - conflict (331)
  - conflict (481)
  - conflict (496)
Domains in SCOPe 2.07: d2frvj_
Chain 'L':
Compound: periplasmic hydrogenase
Species: Desulfovibrio gigas [TaxId:879]
Database cross-references and differences (RAF-indexed):
- Uniprot P12944 (Start-535)
  - conflict (143)
  - conflict (331)
  - conflict (481)
  - conflict (496)
Domains in SCOPe 2.07: d2frvl_
Chain 'S':
Compound: periplasmic hydrogenase
Species: Desulfovibrio gigas [TaxId:879]
Database cross-references and differences (RAF-indexed):
- Uniprot P12943 (Start-263)
  - conflict (23)
  - conflict (88)
Domains in SCOPe 2.07: d2frvs_
Heterogens: NI, MG, SF4, F3S, FCO, O, HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>2frvA (A:)
ltakkrpsvvylhnaectgcsesvlrtvdpyvdelildvismdyhetlmagaghaveeal
heaikgdfvcvieggipmgdggywgkvggrnmydicaevapkakaviaigtcatyggvqa
akpnptgtvgvnealgklgvkainiagcppnpmnfvgtvvhlltkgmpeldkqgrpvmff
getvhdncprlkhfeagefatsfgspeakkgyclyelgckgpdtynncpkqlfnqvnwpv
qaghpciacsepnfwdlyspfysa