PDB entry 2fqm

View 2fqm on RCSB PDB site
Description: Crystal structure of the oligomerization domain of the phosphoprotein of vesicular stomatitis virus
Class: viral protein
Keywords: negative strand RNA virus, polymerase, replication, cofactor, viral protein
Deposited on 2006-01-18, released 2006-02-07
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-10-18, with a file datestamp of 2017-10-13.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Phosphoprotein
    Species: Vesicular stomatitis Indiana virus [TaxId:11277]
    Gene: P
    Database cross-references and differences (RAF-indexed):
    • Uniprot P04880 (4-End)
      • engineered (36)
    Domains in SCOPe 2.07: d2fqma1
  • Chain 'B':
    Compound: Phosphoprotein
    Species: Vesicular stomatitis Indiana virus [TaxId:11277]
    Gene: P
    Database cross-references and differences (RAF-indexed):
    • Uniprot P04880
      • engineered (36)
    Domains in SCOPe 2.07: d2fqmb_
  • Chain 'C':
    Compound: Phosphoprotein
    Species: Vesicular stomatitis Indiana virus [TaxId:11277]
    Gene: P
    Database cross-references and differences (RAF-indexed):
    • Uniprot P04880
      • engineered (36)
    Domains in SCOPe 2.07: d2fqmc_
  • Chain 'D':
    Compound: Phosphoprotein
    Species: Vesicular stomatitis Indiana virus [TaxId:11277]
    Gene: P
    Database cross-references and differences (RAF-indexed):
    • Uniprot P04880 (4-74)
      • engineered (36)
      • cloning artifact (3)
    Domains in SCOPe 2.07: d2fqmd2, d2fqmd3
  • Chain 'E':
    Compound: Phosphoprotein
    Species: Vesicular stomatitis Indiana virus [TaxId:11277]
    Gene: P
    Database cross-references and differences (RAF-indexed):
    • Uniprot P04880 (4-74)
      • engineered (36)
      • cloning artifact (3)
    Domains in SCOPe 2.07: d2fqme2, d2fqme3
  • Chain 'F':
    Compound: Phosphoprotein
    Species: Vesicular stomatitis Indiana virus [TaxId:11277]
    Gene: P
    Database cross-references and differences (RAF-indexed):
    • Uniprot P04880 (4-End)
      • engineered (36)
    Domains in SCOPe 2.07: d2fqmf_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2fqmA (A:)
gshmdwkqpelesdehgktlrltlpeglsgeqksqwmltikavvqsakhwnlaectfeas
gegviikkrqitpdv

    Sequence, based on observed residues (ATOM records): (download) 
    >2fqmA (A:)
dwkqpelesdehgktlrltlpeglsgeqksqwmltikavvqsakhwnlaectfeasgegv
iikkr

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2fqmB (B:)
gshmdwkqpelesdehgktlrltlpeglsgeqksqwmltikavvqsakhwnlaectfeas
gegviikkrqitpdv

    Sequence, based on observed residues (ATOM records): (download) 
    >2fqmB (B:)
kqpelesdehgktlrltlpeglsgeqksqwmltikavvqsakhwnlaectfeasgegvii
kkr

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2fqmC (C:)
gshmdwkqpelesdehgktlrltlpeglsgeqksqwmltikavvqsakhwnlaectfeas
gegviikkrqitpdv

    Sequence, based on observed residues (ATOM records): (download) 
    >2fqmC (C:)
wkqpelesdehgktlrltlpeglsgeqksqwmltikavvqsakhwnlaectfeasgegvi
ikkrqit

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2fqmD (D:)
gshmdwkqpelesdehgktlrltlpeglsgeqksqwmltikavvqsakhwnlaectfeas
gegviikkrqitpdv

    Sequence, based on observed residues (ATOM records): (download) 
    >2fqmD (D:)
mdwkqpelesdehgktlrltlpeglsgeqksqwmltikavvqsakhwnlaectfeasgeg
viikkrqitpdv

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >2fqmE (E:)
gshmdwkqpelesdehgktlrltlpeglsgeqksqwmltikavvqsakhwnlaectfeas
gegviikkrqitpdv

    Sequence, based on observed residues (ATOM records): (download) 
    >2fqmE (E:)
mdwkqpelesdehgktlrltlpeglsgeqksqwmltikavvqsakhwnlaectfeasgeg
viikkrqitpdv

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >2fqmF (F:)
gshmdwkqpelesdehgktlrltlpeglsgeqksqwmltikavvqsakhwnlaectfeas
gegviikkrqitpdv

    Sequence, based on observed residues (ATOM records): (download) 
    >2fqmF (F:)
dwkqpelesdehgktlrltlpeglsgeqksqwmltikavvqsakhwnlaectfeasgegv
iikk