PDB entry 2fmy
View 2fmy on RCSB PDB site
Description: CO-dependent transcription factor CooA from Carboxydothermus hydrogenoformans (Imidazole-bound form)
Class: DNA binding protein
Keywords: DNA transcription regulator, DNA BINDING PROTEIN
Deposited on
2006-01-10, released
2007-01-16
The last revision prior to the SCOPe 2.03 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.209
AEROSPACI score: 0.39
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: carbon monoxide oxidation system transcription regulator CooA-1
Species: Carboxydothermus hydrogenoformans [TaxId:129958]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d2fmya1, d2fmya2 - Chain 'B':
Compound: carbon monoxide oxidation system transcription regulator CooA-1
Species: Carboxydothermus hydrogenoformans [TaxId:129958]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d2fmyb1, d2fmyb2 - Chain 'C':
Compound: carbon monoxide oxidation system transcription regulator CooA-1
Species: Carboxydothermus hydrogenoformans [TaxId:129958]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d2fmyc1, d2fmyc2 - Chain 'D':
Compound: carbon monoxide oxidation system transcription regulator CooA-1
Species: Carboxydothermus hydrogenoformans [TaxId:129958]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d2fmyd1, d2fmyd2 - Heterogens: HEM, IMD, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2fmyA (A:)
atqmrltdtnllevlnseeysgvlkefreqryskkailytpnternlvflvksgrvrvyl
ayedkeftlaileagdifcthtrafiqamedttilytdirnfqnivvefpafslnmvkvl
gdllknsltiinglvfkdarlrlaeflvqaamdtglkvpqgiklelglnteeialmlgtt
rqtvsvllndfkkmgilervnqrtlllkdlqklkefssgv
Sequence, based on observed residues (ATOM records): (download)
>2fmyA (A:)
atqmrltdtnllevlnseeysgvlkefreqryskkailytpnternlvflvksgrvrvyl
ayedkeftlaileagdifcthtrafiqamedttilytdirnfqnivvefpafslnmvkvl
gdllknsltiinglvfkdarlrlaeflvqaamdtglkvpqgiklelglnteeialmlgtt
rqtvsvllndfkkmgilervnqrtlllkdlqklkefss
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2fmyB (B:)
atqmrltdtnllevlnseeysgvlkefreqryskkailytpnternlvflvksgrvrvyl
ayedkeftlaileagdifcthtrafiqamedttilytdirnfqnivvefpafslnmvkvl
gdllknsltiinglvfkdarlrlaeflvqaamdtglkvpqgiklelglnteeialmlgtt
rqtvsvllndfkkmgilervnqrtlllkdlqklkefssgv
Sequence, based on observed residues (ATOM records): (download)
>2fmyB (B:)
atqmrltdtnllevlnseeysgvlkefreqryskkailytpnternlvflvksgrvrvyl
ayedkeftlaileagdifcthtrafiqamedttilytdirnfqnivvefpafslnmvkvl
gdllknsltiinglvfkdarlrlaeflvqaamdtglkvpqgiklelglnteeialmlgtt
rqtvsvllndfkkmgilervnqrtlllkdlqklkefss
- Chain 'C':
Sequence, based on SEQRES records: (download)
>2fmyC (C:)
atqmrltdtnllevlnseeysgvlkefreqryskkailytpnternlvflvksgrvrvyl
ayedkeftlaileagdifcthtrafiqamedttilytdirnfqnivvefpafslnmvkvl
gdllknsltiinglvfkdarlrlaeflvqaamdtglkvpqgiklelglnteeialmlgtt
rqtvsvllndfkkmgilervnqrtlllkdlqklkefssgv
Sequence, based on observed residues (ATOM records): (download)
>2fmyC (C:)
atqmrltdtnllevlnseeysgvlkefreqryskkailytpnternlvflvksgrvrvyl
ayedkeftlaileagdifcthtrafiqamedttilytdirnfqnivvefpafslnmvkvl
gdllknsltiinglvfkdarlrlaeflvqaamdtglkvpqgiklelglnteeialmlgtt
rqtvsvllndfkkmgilervnqrtlllkdlqklkefss
- Chain 'D':
Sequence, based on SEQRES records: (download)
>2fmyD (D:)
atqmrltdtnllevlnseeysgvlkefreqryskkailytpnternlvflvksgrvrvyl
ayedkeftlaileagdifcthtrafiqamedttilytdirnfqnivvefpafslnmvkvl
gdllknsltiinglvfkdarlrlaeflvqaamdtglkvpqgiklelglnteeialmlgtt
rqtvsvllndfkkmgilervnqrtlllkdlqklkefssgv
Sequence, based on observed residues (ATOM records): (download)
>2fmyD (D:)
atqmrltdtnllevlnseeysgvlkefreqryskkailytpnternlvflvksgrvrvyl
ayedkeftlaileagdifcthtrafiqamedttilytdirnfqnivvefpafslnmvkvl
gdllknsltiinglvfkdarlrlaeflvqaamdtglkvpqgiklelglnteeialmlgtt
rqtvsvllndfkkmgilervnqrtlllkdlqklkefss