PDB entry 2fkw

View 2fkw on RCSB PDB site
Description: Structure of LH2 from Rps. acidophila crystallized in lipidic mesophases
Class: membrane protein, photosynthesis
Keywords: Light Harvesting Complex B800-B850, Lipidic Mesophase, crystallization, cubic phase, sponge phase, LDAO, rhodopin glucoside carotenoid, MEMBRANE PROTEIN, PHOTOSYNTHESIS
Deposited on 2006-01-05, released 2006-03-28
The last revision prior to the SCOPe 2.08 freeze date was dated 2016-03-30, with a file datestamp of 2016-03-25.
Experiment type: XRAY
Resolution: 2.45 Å
R-factor: N/A
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'A':
  Compound: Light-harvesting protein B-800/850, alpha chain
  Species: Rhodoblastus acidophilus [TaxId:1074]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P26789 (0-52)
    • modified residue (0)
  Domains in SCOPe 2.08: d2fkwa_
• Chain 'B':
  Compound: Light-harvesting protein B-800/850, beta chain
  Species: Rhodoblastus acidophilus [TaxId:1074]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P26790 (0-40)
  Domains in SCOPe 2.08: d2fkwb_
• Chain 'C':
  Compound: Light-harvesting protein B-800/850, alpha chain
  Species: Rhodoblastus acidophilus [TaxId:1074]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P26789 (0-52)
    • modified residue (0)
  Domains in SCOPe 2.08: d2fkwc_
• Chain 'D':
  Compound: Light-harvesting protein B-800/850, beta chain
  Species: Rhodoblastus acidophilus [TaxId:1074]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P26790 (0-40)
  Domains in SCOPe 2.08: d2fkwd_
• Chain 'E':
  Compound: Light-harvesting protein B-800/850, alpha chain
  Species: Rhodoblastus acidophilus [TaxId:1074]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P26789 (0-52)
    • modified residue (0)
  Domains in SCOPe 2.08: d2fkwe_
• Chain 'F':
  Compound: Light-harvesting protein B-800/850, beta chain
  Species: Rhodoblastus acidophilus [TaxId:1074]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P26790 (0-40)
  Domains in SCOPe 2.08: d2fkwf_
• Chain 'G':
  Compound: Light-harvesting protein B-800/850, alpha chain
  Species: Rhodoblastus acidophilus [TaxId:1074]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P26789 (0-52)
    • modified residue (0)
  Domains in SCOPe 2.08: d2fkwg_
• Chain 'H':
  Compound: Light-harvesting protein B-800/850, beta chain
  Species: Rhodoblastus acidophilus [TaxId:1074]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P26790 (0-40)
  Domains in SCOPe 2.08: d2fkwh_
• Chain 'I':
  Compound: Light-harvesting protein B-800/850, alpha chain
  Species: Rhodoblastus acidophilus [TaxId:1074]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P26789 (0-52)
    • modified residue (0)
  Domains in SCOPe 2.08: d2fkwi_
• Chain 'J':
  Compound: Light-harvesting protein B-800/850, beta chain
  Species: Rhodoblastus acidophilus [TaxId:1074]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P26790 (0-40)
  Domains in SCOPe 2.08: d2fkwj_
• Chain 'K':
  Compound: Light-harvesting protein B-800/850, alpha chain
  Species: Rhodoblastus acidophilus [TaxId:1074]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P26789 (0-52)
    • modified residue (0)
  Domains in SCOPe 2.08: d2fkwk_
• Chain 'L':
  Compound: Light-harvesting protein B-800/850, beta chain
  Species: Rhodoblastus acidophilus [TaxId:1074]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P26790 (0-40)
  Domains in SCOPe 2.08: d2fkwl_
• Chain 'M':
  Compound: Light-harvesting protein B-800/850, alpha chain
  Species: Rhodoblastus acidophilus [TaxId:1074]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P26789 (0-52)
    • modified residue (0)
  Domains in SCOPe 2.08: d2fkwm_
• Chain 'N':
  Compound: Light-harvesting protein B-800/850, beta chain
  Species: Rhodoblastus acidophilus [TaxId:1074]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P26790 (0-40)
  Domains in SCOPe 2.08: d2fkwn_
• Chain 'O':
  Compound: Light-harvesting protein B-800/850, alpha chain
  Species: Rhodoblastus acidophilus [TaxId:1074]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P26789 (0-52)
    • modified residue (0)
  Domains in SCOPe 2.08: d2fkwo_
• Chain 'P':
  Compound: Light-harvesting protein B-800/850, beta chain
  Species: Rhodoblastus acidophilus [TaxId:1074]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P26790 (0-40)
  Domains in SCOPe 2.08: d2fkwp_
• Chain 'R':
  Compound: Light-harvesting protein B-800/850, alpha chain
  Species: Rhodoblastus acidophilus [TaxId:1074]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P26789 (0-52)
    • modified residue (0)
  Domains in SCOPe 2.08: d2fkwr_
• Chain 'S':
  Compound: Light-harvesting protein B-800/850, beta chain
  Species: Rhodoblastus acidophilus [TaxId:1074]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P26790 (0-40)
  Domains in SCOPe 2.08: d2fkws_
• Heterogens: RG1, BCL, LDA, HOH

PDB Chain Sequences:

• Chain 'A':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >2fkwA (A:)
  mnqgkiwtvvnpaigipallgsvtviailvhlailshttwfpaywqggvkkaa
  

  
  
• Chain 'B':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >2fkwB (B:)
  atltaeqseelhkyvidgtrvflglalvahflafsatpwlh
  

  
  
• Chain 'C':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >2fkwC (C:)
  mnqgkiwtvvnpaigipallgsvtviailvhlailshttwfpaywqggvkkaa
  

  
  
• Chain 'D':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >2fkwD (D:)
  atltaeqseelhkyvidgtrvflglalvahflafsatpwlh
  

  
  
• Chain 'E':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >2fkwE (E:)
  mnqgkiwtvvnpaigipallgsvtviailvhlailshttwfpaywqggvkkaa
  

  
  
• Chain 'F':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >2fkwF (F:)
  atltaeqseelhkyvidgtrvflglalvahflafsatpwlh
  

  
  
• Chain 'G':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >2fkwG (G:)
  mnqgkiwtvvnpaigipallgsvtviailvhlailshttwfpaywqggvkkaa
  

  
  
• Chain 'H':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >2fkwH (H:)
  atltaeqseelhkyvidgtrvflglalvahflafsatpwlh
  

  
  
• Chain 'I':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >2fkwI (I:)
  mnqgkiwtvvnpaigipallgsvtviailvhlailshttwfpaywqggvkkaa
  

  
  
• Chain 'J':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >2fkwJ (J:)
  atltaeqseelhkyvidgtrvflglalvahflafsatpwlh
  

  
  
• Chain 'K':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >2fkwK (K:)
  mnqgkiwtvvnpaigipallgsvtviailvhlailshttwfpaywqggvkkaa
  

  
  
• Chain 'L':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >2fkwL (L:)
  atltaeqseelhkyvidgtrvflglalvahflafsatpwlh
  

  
  
• Chain 'M':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >2fkwM (M:)
  mnqgkiwtvvnpaigipallgsvtviailvhlailshttwfpaywqggvkkaa
  

  
  
• Chain 'N':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >2fkwN (N:)
  atltaeqseelhkyvidgtrvflglalvahflafsatpwlh
  

  
  
• Chain 'O':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >2fkwO (O:)
  mnqgkiwtvvnpaigipallgsvtviailvhlailshttwfpaywqggvkkaa
  

  
  
• Chain 'P':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >2fkwP (P:)
  atltaeqseelhkyvidgtrvflglalvahflafsatpwlh
  

  
  
• Chain 'R':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >2fkwR (R:)
  mnqgkiwtvvnpaigipallgsvtviailvhlailshttwfpaywqggvkkaa
  

  
  
• Chain 'S':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >2fkwS (S:)
  atltaeqseelhkyvidgtrvflglalvahflafsatpwlh