PDB entry 2fjg

View 2fjg on RCSB PDB site
Description: Structure of the G6 Fab, a phage derived Fab fragment, in complex with VEGF
Class: hormone/growth factor/immune system
Keywords: Protein Fab Complex, FAB, VEGF, Cystine knot
Deposited on 2006-01-02, released 2006-02-07
The last revision prior to the SCOP 1.75 freeze date was dated 2006-11-07, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.201
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Fab light chain
    Species: HOMO SAPIENS
  • Chain 'B':
    Compound: Fab heavy chain
    Species: HOMO SAPIENS
    Domains in SCOP 1.75: d2fjgb1, d2fjgb2
  • Chain 'H':
    Compound: Fab heavy chain
    Species: HOMO SAPIENS
    Domains in SCOP 1.75: d2fjgh1, d2fjgh2
  • Chain 'L':
    Compound: Fab light chain
    Species: HOMO SAPIENS
  • Chain 'V':
    Compound: Vascular Endothelial Growth Factor A
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2fjgv1
  • Chain 'W':
    Compound: Vascular Endothelial Growth Factor A
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d2fjgw1
  • Heterogens: SO4

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2fjgB (B:)
evqlvesggglvqpggslrlscaasgftisdywihwvrqapgkglewvagitpaggytyy
adsvkgrftisadtskntaylqmnslraedtavyycarfvfflpyamdywgqgtlvtvss
astkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqss
glyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscdkth

    Sequence, based on observed residues (ATOM records): (download) 
    >2fjgB (B:)
evqlvesggglvqpggslrlscaasgftisdywihwvrqapgkglewvagitpaggytyy
adsvkgrftisadtskntaylqmnslraedtavyycarfvfflpyamdywgqgtlvtvss
astkgpsvfplapssgtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssglysl
ssvvtvpssslgtqtyicnvnhkpsntkvdkkvepksc

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >2fjgH (H:)
evqlvesggglvqpggslrlscaasgftisdywihwvrqapgkglewvagitpaggytyy
adsvkgrftisadtskntaylqmnslraedtavyycarfvfflpyamdywgqgtlvtvss
astkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqss
glyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscdkth

    Sequence, based on observed residues (ATOM records): (download) 
    >2fjgH (H:)
evqlvesggglvqpggslrlscaasgftisdywihwvrqapgkglewvagitpaggytyy
adsvkgrftisadtskntaylqmnslraedtavyycarfvfflpyamdywgqgtlvtvss
astkgpsvfplapssgtaalgclvkdyfpepvtvswnsgaltsgvhtfpavlqssglysl
ssvvtvpssslgtqtyicnvnhkpsntkvdkkvepksc

  • Chain 'L':
    No sequence available.

  • Chain 'V':
    Sequence, based on SEQRES records: (download) 
    >2fjgV (V:)
gqnhhevvkfmdvyqrsychpietlvdifqeypdeieyifkpscvplmrcggccndegle
cvpteesnitmqimrikphqgqhigemsflqhnkcecrpkkd

    Sequence, based on observed residues (ATOM records): (download) 
    >2fjgV (V:)
vvkfmdvyqrsychpietlvdifqeypdeieyifkpscvplmrcggccndeglecvptee
snitmqimrikphqgqhigemsflqhnkcecrpkk

  • Chain 'W':
    Sequence, based on SEQRES records: (download) 
    >2fjgW (W:)
gqnhhevvkfmdvyqrsychpietlvdifqeypdeieyifkpscvplmrcggccndegle
cvpteesnitmqimrikphqgqhigemsflqhnkcecrpkkd

    Sequence, based on observed residues (ATOM records): (download) 
    >2fjgW (W:)
vvkfmdvyqrsychpietlvdifqeypdeieyifkpscvplmrcggccndeglecvptee
snitmqimrikphqgqhigemsflqhnkcecrpk