SCOPe 2.08: Structural Classification of Proteins

PDB entry 2fge

View 2fge on RCSB PDB site
Description: Crystal structure of presequence protease PreP from Arabidopsis thaliana
Class: hydrolase, plant protein
Keywords: peptidasome; protease-peptide complex, hydrolase, plant protein
Deposited on 2005-12-21, released 2006-05-16
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.209
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: zinc metalloprotease (insulinase family)
Species: Arabidopsis thaliana [TaxId:3702]
Database cross-references and differences (RAF-indexed):
- Uniprot Q9LJL3
  - modified residue (49)
  - engineered (79)
  - modified residue (177)
  - modified residue (257)
  - modified residue (298)
  - modified residue (325)
  - modified residue (380)
  - modified residue (400)
  - modified residue (422)
  - modified residue (433)
  - modified residue (480)
  - modified residue (505)
  - modified residue (603)
  - modified residue (650)
  - modified residue (661)
  - modified residue (687)
  - modified residue (703)
  - modified residue (706)
  - modified residue (713)
  - modified residue (717)
  - modified residue (761)
Domains in SCOPe 2.08: d2fgea1, d2fgea2, d2fgea3, d2fgea4
Chain 'B':
Compound: zinc metalloprotease (insulinase family)
Species: Arabidopsis thaliana [TaxId:3702]
Database cross-references and differences (RAF-indexed):
- Uniprot Q9LJL3
  - modified residue (49)
  - engineered (79)
  - modified residue (177)
  - modified residue (257)
  - modified residue (298)
  - modified residue (325)
  - modified residue (380)
  - modified residue (400)
  - modified residue (422)
  - modified residue (433)
  - modified residue (480)
  - modified residue (505)
  - modified residue (603)
  - modified residue (650)
  - modified residue (661)
  - modified residue (687)
  - modified residue (703)
  - modified residue (706)
  - modified residue (713)
  - modified residue (717)
  - modified residue (761)
Domains in SCOPe 2.08: d2fgeb1, d2fgeb2, d2fgeb3, d2fgeb4
Chain 'D':
Compound: nonspecific peptide AALTRA
Database cross-references and differences (RAF-indexed):
- PDB 2FGE (0-5)
Chain 'E':
Compound: nonspecific peptide AALTRA
Database cross-references and differences (RAF-indexed):
- PDB 2FGE (0-5)
Heterogens: ZN, CL, MG, HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>2fgeA (A:)
vatqpaplypdvgqdeaeklgfekvseefiseckskailfkhkktgcevmsvsnedenkv
fgvvfrtppkdstgiphilqhsvlcgsrkypvkepfvellkgslhtflnaftypdrtcyp
vastntkdfynlvdvyldavffpkcvddahtfqqegwhyelndpsedisykgvvfnemkg
vysqpdnilgriaqqalspentygvdsggdpkdipnltfeefkefhrqyyhpsnariwfy
gdddpvhrlrvlseyldmfeaspspnsskikfqklfsepvrlvekypagrdgdlkkkhml
cvnwllsekpldlqtqlalgfldhlmlgtpasplrkillesglgealvssglsdellqpq
fgiglkgvseenvqkveelimdtlkklaeegfdndaveasmntiefslrenntgsfprgl
slmlqsiskwiydmdpfeplkyteplkalktriaeegskavfsplieklilnnshrvtie
mqpdpekatqeeveeknilekvkaamteedlaelarateelklkqetpdppealrcvpsl
nlgdipkeptyvptevgdingvkvlrhdlftndiiytevvfdigslkhellplvplfcqs
llemgtkdltfvqlnqligrktggisvypltssvrgkdepcskiivrgksmagraddlfn
lmncllqevqftdqqrfkqfvsqsrarmenrlrgsghgiaaarmdamlniagwmseqmgg
lsyleflhtlekkvdedwegisssleeirrsllarngcivnmtadgksltnveksvakfl
dllpenpsgglvtwdgrlplrneaiviptqvnyvgkagniystgyeldgsayviskhisn
twlwdrvrvsggayggfcdfdshsgvfsylsyrdpnllktldiydgtgdflrgldvdqet
ltkaiigtigdvdsyqlpdakgyssllrhllgvtdeerqrkreeilttslkdfkdfaqai
dvvrdkgvavavasaedidaannersnffevkkal

Sequence, based on observed residues (ATOM records): (download)

>2fgeA (A:)
deaeklgfekvseefiseckskailfkhkktgcevmsvsnedenkvfgvvfrtppkdstg
iphilqhsvlcgsrkypvkepfvellkgslhtflnaftypdrtcypvastntkdfynlvd
vyldavffpkcvddahtfqqegwhyelndpsedisykgvvfnemkgvysqpdnilgriaq
qalspentygvdsggdpkdipnltfeefkefhrqyyhpsnariwfygdddpvhrlrvlse
yldmfeaspspnsskikfqklfsepvrlvekypagrdgdlkkkhmlcvnwllsekpldlq
tqlalgfldhlmlgtpasplrkillesglgealvssglsdellqpqfgiglkgvseenvq
kveelimdtlkklaeegfdndaveasmntiefslrenntgsfprglslmlqsiskwiydm
dpfeplkyteplkalktriaeegskavfsplieklilnnshrvtiemqpdpekatqeeve
eknilekvkaamteedlaelarateelklkqetpdppealrcvpslnlgdipkeptyvpt
evgdingvkvlrhdlftndiiytevvfdigslkhellplvplfcqsllemgtkdltfvql
nqligrktggisvypltssvrgkdepcskiivrgksmagraddlfnlmncllqevqftdq
qrfkqfvsqsrarmenrlrgsghgiaaarmdamlniagwmseqmgglsyleflhtlekkv
dedwegisssleeirrsllarngcivnmtadgksltnveksvakfldllpenpsgglvtw
dgrlplrneaiviptqvnyvgkagniystgyeldgsayviskhisntwlwdrvrvsggay
ggfcdfdshsgvfsylsyrdpnllktldiydgtgdflrgldvdqetltkaiigtigdvds
yqlpdakgyssllrhllgvtdeerqrkreeilttslkdfkdfaqaidvvrdkgvavavas
aedidaannersnffevkk

Chain 'B':
Sequence, based on SEQRES records: (download)

>2fgeB (B:)
vatqpaplypdvgqdeaeklgfekvseefiseckskailfkhkktgcevmsvsnedenkv
fgvvfrtppkdstgiphilqhsvlcgsrkypvkepfvellkgslhtflnaftypdrtcyp
vastntkdfynlvdvyldavffpkcvddahtfqqegwhyelndpsedisykgvvfnemkg
vysqpdnilgriaqqalspentygvdsggdpkdipnltfeefkefhrqyyhpsnariwfy
gdddpvhrlrvlseyldmfeaspspnsskikfqklfsepvrlvekypagrdgdlkkkhml
cvnwllsekpldlqtqlalgfldhlmlgtpasplrkillesglgealvssglsdellqpq
fgiglkgvseenvqkveelimdtlkklaeegfdndaveasmntiefslrenntgsfprgl
slmlqsiskwiydmdpfeplkyteplkalktriaeegskavfsplieklilnnshrvtie
mqpdpekatqeeveeknilekvkaamteedlaelarateelklkqetpdppealrcvpsl
nlgdipkeptyvptevgdingvkvlrhdlftndiiytevvfdigslkhellplvplfcqs
llemgtkdltfvqlnqligrktggisvypltssvrgkdepcskiivrgksmagraddlfn
lmncllqevqftdqqrfkqfvsqsrarmenrlrgsghgiaaarmdamlniagwmseqmgg
lsyleflhtlekkvdedwegisssleeirrsllarngcivnmtadgksltnveksvakfl
dllpenpsgglvtwdgrlplrneaiviptqvnyvgkagniystgyeldgsayviskhisn
twlwdrvrvsggayggfcdfdshsgvfsylsyrdpnllktldiydgtgdflrgldvdqet
ltkaiigtigdvdsyqlpdakgyssllrhllgvtdeerqrkreeilttslkdfkdfaqai
dvvrdkgvavavasaedidaannersnffevkkal

Sequence, based on observed residues (ATOM records): (download)

>2fgeB (B:)
deaeklgfekvseefiseckskailfkhkktgcevmsvsnedenkvfgvvfrtppkdstg
iphilqhsvlcgsrkypvkepfvellkgslhtflnaftypdrtcypvastntkdfynlvd
vyldavffpkcvddahtfqqegwhyelndpsedisykgvvfnemkgvysqpdnilgriaq
qalspentygvdsggdpkdipnltfeefkefhrqyyhpsnariwfygdddpvhrlrvlse
yldmfeaspspnsskikfqklfsepvrlvekypagrdgdlkkkhmlcvnwllsekpldlq
tqlalgfldhlmlgtpasplrkillesglgealvssglsdellqpqfgiglkgvseenvq
kveelimdtlkklaeegfdndaveasmntiefslrenntgsfprglslmlqsiskwiydm
dpfeplkyteplkalktriaeegskavfsplieklilnnshrvtiemqpdpekatqeeve
eknilekvkaamteedlaelarateelklkqetpdppealrcvpslnlgdipkeptyvpt
evgdingvkvlrhdlftndiiytevvfdigslkhellplvplfcqsllemgtkdltfvql
nqligrktggisvypltssvrgkdepcskiivrgksmagraddlfnlmncllqevqftdq
qrfkqfvsqsrarmenrlrgsghgiaaarmdamlniagwmseqmgglsyleflhtlekkv
dedwegisssleeirrsllarngcivnmtadgksltnveksvakfldllpenpsgglvtw
dgrlplrneaiviptqvnyvgkagniystgyeldgsayviskhisntwlwdrvrvsggay
ggfcdfdshsgvfsylsyrdpnllktldiydgtgdflrgldvdqetltkaiigtigdvds
yqlpdakgyssllrhllgvtdeerqrkreeilttslkdfkdfaqaidvvrdkgvavavas
aedidaannersnffevkk

Chain 'D':
No sequence available.
Chain 'E':
No sequence available.