PDB entry 2fbm

View 2fbm on RCSB PDB site
Description: Acetyltransferase domain of CDY1
Class: structural genomics, unknown function
Keywords: Acetyltransferase, Structural Genomics, Structural Genomics Consortium, SGC, UNKNOWN FUNCTION
Deposited on 2005-12-09, released 2005-12-27
The last revision prior to the SCOPe 2.04 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.28 Å
R-factor: 0.191
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Y chromosome chromodomain protein 1, telomeric isoform b
    Species: Homo sapiens [TaxId:9606]
    Gene: CDY1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d2fbma1
  • Chain 'B':
    Compound: Y chromosome chromodomain protein 1, telomeric isoform b
    Species: Homo sapiens [TaxId:9606]
    Gene: CDY1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d2fbmb_
  • Chain 'C':
    Compound: Y chromosome chromodomain protein 1, telomeric isoform b
    Species: Homo sapiens [TaxId:9606]
    Gene: CDY1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d2fbmc_
  • Heterogens: CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2fbmA (A:)
mgsshhhhhhssglvprgsstyrdivvkkedgftqivlstrsteknalntevikeivnal
nsaaaddsklvlfsaagsvfccgldfgyfvkhlrnnrntaslemvdtiknfvntfiqfkk
pivvsvngpaiglgasilplcdlvwanekawfqtpyttfgqspdgcssitfpkmmgkasa
nemliagrkltareacakglvsqvfltgtftqevmiqikelasynpivleeckalvrcni
kleleqanerecevlrkiwssaqgiesmlkipllgykaafpprktqndqrw

    Sequence, based on observed residues (ATOM records): (download) 
    >2fbmA (A:)
tyrdivvkkedgftqivlstrsteknalntevikeivnalnsaaaddsklvlfsaagsvf
ccgldfgyfvkhlrnnrntaslemvdtiknfvntfiqfkkpivvsvngpaiglgasilpl
cdlvwanekawfqtpyttfgqspdgcssitfpkmmgkasanemliagrkltareacakgl
vsqvfltgtftqevmiqikelasynpivleeckalvrcnikleleqanerecevlrkiws
saqgiesmlki

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2fbmB (B:)
mgsshhhhhhssglvprgsstyrdivvkkedgftqivlstrsteknalntevikeivnal
nsaaaddsklvlfsaagsvfccgldfgyfvkhlrnnrntaslemvdtiknfvntfiqfkk
pivvsvngpaiglgasilplcdlvwanekawfqtpyttfgqspdgcssitfpkmmgkasa
nemliagrkltareacakglvsqvfltgtftqevmiqikelasynpivleeckalvrcni
kleleqanerecevlrkiwssaqgiesmlkipllgykaafpprktqndqrw

    Sequence, based on observed residues (ATOM records): (download) 
    >2fbmB (B:)
yrdivvkkedgftqivlstrsteknalntevikeivnalnsaaaddsklvlfsaagsvfc
cgldfgyfvkhlrnnrntaslemvdtiknfvntfiqfkkpivvsvngpaiglgasilplc
dlvwanekawfqtpyttfgqspdgcssitfpkmmgkasanemliagrkltareacakglv
sqvfltgtftqevmiqikelasynpivleeckalvrcnikleleqanerecevlrkiwss
aqgiesmlki

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2fbmC (C:)
mgsshhhhhhssglvprgsstyrdivvkkedgftqivlstrsteknalntevikeivnal
nsaaaddsklvlfsaagsvfccgldfgyfvkhlrnnrntaslemvdtiknfvntfiqfkk
pivvsvngpaiglgasilplcdlvwanekawfqtpyttfgqspdgcssitfpkmmgkasa
nemliagrkltareacakglvsqvfltgtftqevmiqikelasynpivleeckalvrcni
kleleqanerecevlrkiwssaqgiesmlkipllgykaafpprktqndqrw

    Sequence, based on observed residues (ATOM records): (download) 
    >2fbmC (C:)
yrdivvkkedgftqivlstrsteknalntevikeivnalnsaaaddsklvlfsaagsvfc
cgldfgyfvkhlrnnrntaslemvdtiknfvntfiqfkkpivvsvngpaiglgasilplc
dlvwanekawfqtpyttfgqspdgcssitfpkmmgkasanemliagrkltareacakglv
sqvfltgtftqevmiqikelasynpivleeckalvrcnikleleqanerecevlrkiwss
aqgiesmlki