PDB entry 2f9d

View 2f9d on RCSB PDB site
Description: 2.5 angstrom resolution structure of the spliceosomal protein p14 bound to region of SF3b155
Class: RNA Binding Protein
Keywords: p14 SF3bp14 SF3b155 SAP155 RRM
Deposited on 2005-12-05, released 2006-01-24
The last revision prior to the SCOP 1.73 freeze date was dated 2006-02-14, with a file datestamp of 2007-06-28.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.224
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'A':
  Compound: Pre-mRNA branch site protein p14
  Species: HOMO SAPIENS
  Gene: SF3B14
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q9Y3B4 (Start-124)
  Domains in SCOP 1.73: d2f9da1
• Chain 'B':
  Compound: Pre-mRNA branch site protein p14
  Species: HOMO SAPIENS
  Gene: SF3B14
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q9Y3B4 (Start-124)
  Domains in SCOP 1.73: d2f9db1
• Chain 'P':
  Compound: Splicing factor 3B subunit 1
  Species: HOMO SAPIENS
  Gene: SF3B1, SAP155
  Database cross-references and differences (RAF-indexed):
  • Uniprot O75533 (Start-42)
    • modified residue (5)
    • modified residue (34)
• Chain 'Q':
  Compound: Splicing factor 3B subunit 1
  Species: HOMO SAPIENS
  Gene: SF3B1, SAP155
  Database cross-references and differences (RAF-indexed):
  • Uniprot O75533 (Start-42)
    • modified residue (5)
    • modified residue (34)
• Heterogens: HOH

PDB Chain Sequences:

• Chain 'A':
  Sequence, based on SEQRES records: (download)
  

  >2f9dA (A:)
  mamqaakranirlppevnrilyirnlpykitaeemydifgkygpirqirvgntpetrgta
  yvvyedifdaknacdhlsgfnvcnrylvvlyynanrafqkmdtkkkeeqlkllkekygin
  tdppk
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >2f9dA (A:)
  rlppevnrilyirnlpykitaeemydifgkygpirqirvgntpetrgtayvvyedifdak
  nacdhlsgfnvcnrylvvlyynanrafqkmdtkkkeeqlkllkekygintdppk
  

  
  
• Chain 'B':
  Sequence, based on SEQRES records: (download)
  

  >2f9dB (B:)
  mamqaakranirlppevnrilyirnlpykitaeemydifgkygpirqirvgntpetrgta
  yvvyedifdaknacdhlsgfnvcnrylvvlyynanrafqkmdtkkkeeqlkllkekygin
  tdppk
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >2f9dB (B:)
  rlppevnrilyirnlpykitaeemydifgkygpirqirvgntpetrgtayvvyedifdak
  nacdhlsgfnvcnrylvvlyynanrafqkmdtkkkeeqlkllkekygintdppk
  

  
  
• Chain 'P':
  No sequence available.
  
  
• Chain 'Q':
  No sequence available.