PDB entry 2f9d

View 2f9d on RCSB PDB site
Description: 2.5 angstrom resolution structure of the spliceosomal protein p14 bound to region of SF3b155
Class: RNA binding protein
Keywords: p14 SF3bp14 SF3b155 SAP155 RRM, RNA Binding Protein
Deposited on 2005-12-05, released 2006-01-24
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-10-18, with a file datestamp of 2017-10-13.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: N/A
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Pre-mRNA branch site protein p14
    Species: Homo sapiens [TaxId:9606]
    Gene: SF3B14
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2f9da1
  • Chain 'B':
    Compound: Pre-mRNA branch site protein p14
    Species: Homo sapiens [TaxId:9606]
    Gene: SF3B14
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2f9db_
  • Chain 'P':
    Compound: Splicing factor 3B subunit 1
    Species: Homo sapiens [TaxId:9606]
    Gene: SF3B1, SAP155
    Database cross-references and differences (RAF-indexed):
    • Uniprot O75533 (Start-42)
      • modified residue (5)
      • modified residue (34)
    Domains in SCOPe 2.08: d2f9dp_
  • Chain 'Q':
    Compound: Splicing factor 3B subunit 1
    Species: Homo sapiens [TaxId:9606]
    Gene: SF3B1, SAP155
    Database cross-references and differences (RAF-indexed):
    • Uniprot O75533 (Start-42)
      • modified residue (5)
      • modified residue (34)
    Domains in SCOPe 2.08: d2f9dq_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >2f9dA (A:)
    mamqaakranirlppevnrilyirnlpykitaeemydifgkygpirqirvgntpetrgta
    yvvyedifdaknacdhlsgfnvcnrylvvlyynanrafqkmdtkkkeeqlkllkekygin
    tdppk
    

    Sequence, based on observed residues (ATOM records): (download)
    >2f9dA (A:)
    rlppevnrilyirnlpykitaeemydifgkygpirqirvgntpetrgtayvvyedifdak
    nacdhlsgfnvcnrylvvlyynanrafqkmdtkkkeeqlkllkekygintdppk
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >2f9dB (B:)
    mamqaakranirlppevnrilyirnlpykitaeemydifgkygpirqirvgntpetrgta
    yvvyedifdaknacdhlsgfnvcnrylvvlyynanrafqkmdtkkkeeqlkllkekygin
    tdppk
    

    Sequence, based on observed residues (ATOM records): (download)
    >2f9dB (B:)
    rlppevnrilyirnlpykitaeemydifgkygpirqirvgntpetrgtayvvyedifdak
    nacdhlsgfnvcnrylvvlyynanrafqkmdtkkkeeqlkllkekygintdppk
    

  • Chain 'P':
    Sequence, based on SEQRES records: (download)
    >2f9dP (P:)
    ghimsmtpeqlqawrwereidernrplsdeeldamfpegykvl
    

    Sequence, based on observed residues (ATOM records): (download)
    >2f9dP (P:)
    smtpeqlqawrwereidernrplsdeeldamfpegykvl
    

  • Chain 'Q':
    Sequence, based on SEQRES records: (download)
    >2f9dQ (Q:)
    ghimsmtpeqlqawrwereidernrplsdeeldamfpegykvl
    

    Sequence, based on observed residues (ATOM records): (download)
    >2f9dQ (Q:)
    smtpeqlqawrwereidernrplsdeeldamfpegykvl