PDB entry 2f6x

View 2f6x on RCSB PDB site
Description: Crystal Structure of (S)-3-O-Geranylgeranylglyceryl Phosphate Synthase complexed with sn-G1P and MPD
Class: transferase
Keywords: non-canonical TIM-barrel; prenyltransferase; archaeal lipid synthesis; sn-glycerol-1-phosphate; 2-methyl-2,4-pentanediol; dimer
Deposited on 2005-11-29, released 2006-01-24
The last revision prior to the SCOP 1.73 freeze date was dated 2006-03-28, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.188
AEROSPACI score: 0.45 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: (S)-3-O-Geranylgeranylglyceryl Phosphate Synthase
    Species: Archaeoglobus fulgidus
    Gene: pcrB
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d2f6xa1
  • Chain 'B':
    Compound: (S)-3-O-Geranylgeranylglyceryl Phosphate Synthase
    Species: Archaeoglobus fulgidus
    Gene: pcrB
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d2f6xb1
  • Heterogens: 1GP, MPD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >2f6xA (A:)
    gshmrwrkwrhitkldpdrtntdeiikavadsgtdavmisgtqnvtyekartliekvsqy
    glpivvepsdpsnvvydvdylfvptvlnsadgdwitgkhaqwvrmhyenlqkfteiiese
    fiqiegyivlnpdsavarvtkalcnidkelaasyalvgeklfnlpiiyieysgtygnpel
    vaevkkvldkarlfygggidsrekaremlryadtiivgnviyekgidafletlp
    

    Sequence, based on observed residues (ATOM records): (download)
    >2f6xA (A:)
    mrwrkwrhitkldpdrtntdeiikavadsgtdavmisgtqnvtyekartliekvsqyglp
    ivvepsdpsnvvydvdylfvptvlnsadgdwitgkhaqwvrmhyenlqkfteiiesefiq
    iegyivlnpdsavarvtkalcnidkelaasyalvgeklfnlpiiyieysgtygnpelvae
    vkkvldkarlfygggidsrekaremlryadtiivgnviyekgidafletlp
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >2f6xB (B:)
    gshmrwrkwrhitkldpdrtntdeiikavadsgtdavmisgtqnvtyekartliekvsqy
    glpivvepsdpsnvvydvdylfvptvlnsadgdwitgkhaqwvrmhyenlqkfteiiese
    fiqiegyivlnpdsavarvtkalcnidkelaasyalvgeklfnlpiiyieysgtygnpel
    vaevkkvldkarlfygggidsrekaremlryadtiivgnviyekgidafletlp
    

    Sequence, based on observed residues (ATOM records): (download)
    >2f6xB (B:)
    mrwrkwrhitkldpdrtntdeiikavadsgtdavmisgtqnvtyekartliekvsqyglp
    ivvepsdpsnvvydvdylfvptvlnsadgdwitgkhaqwvrmhyenlqkfteiiesefiq
    iegyivlnpdsavarvtkalcnidkelaasyalvgeklfnlpiiyieysgtygnpelvae
    vkkvldkarlfygggidsrekaremlryadtiivgnviyekgidafletlp